Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4014 ATGAAGGTCGGTGCAGCAGAGCTATGCATTTTGTTGTTCACCACATCTTGCCTTCTTCACTTTTCATCAGAGCTACAACATTCTATGCCTTATGATTATTCTGCTACTACTCAGTGTGTGACAGAACCTAAGAGGGCACAATATGGAGGAGGCATTATAGTAAATCCAGGATTTGATCACAACATAAAGGGTTGGAGAGTGTTTGGAAATGGAACAATCGAGGAACGAATATCAAATGATGAAAATAGATTCATTGTTGCTAGCAACAGAAGACAAACATTGGATGGTTTCTCACAGAAGGTCCAACTGAAGAAAGGAATGATATACATGTTTTCTGCTTGGTTTCAGCTCAGTGAAGGAAGTGACATTGTGTCAGTTGTATTTAAAAGAAATGGAAGTGAACTGGTGCATGGTGGCCATGTGATAGCCAAACATGGATGTTGGTCGCTGCTAAAAGGCGGTATAGTTGCAAACTTTTCAAGCCCTGCTGAGATTCTTTTTGAGAGTGAGAATCCAATTGTGGAATTATGGGTTCATAGTGTCTCCTTACAACCATTCACCAGAGAGCAATGGAGGTCACACCAAGATAGCAGCATTGAGAGGGTACGTAAGAGCAGGGTGAGATTCCAGGTAACTCATCCAAATGAAACAGTGTTGGAAGGAGCAACAGTTGTTATTAAACAAACAAGGGCAAATTTTCCATATGGATGTGCGATGAACCGTCATATCCTCACAAACAGTGACTACCAGAAATGGTTTGTGTCAAGATTCAAATACACAACTTTCACTAACGAGATGAAGTGGTATAGTACAGAGAAAATCCAAGGCCATGAAAACTATACTATCCCAGATGCCATGCTGAAATTTGCTAAGGAAAATGGCATATCTGTCAGAGGTCATAACATTTTGTGGGACAGTGAAAGACGTCAACCTGAATGGGATTTGTCCCTGTCTCCTGATGAATTACGAGAAGCAGCTGCAAAAAGAATGAAATCCGTGGTCTCAAGGTATAAAGGACAATTGATTGCATGGGACGTGGTAAATGAGAATGTCCACTTCCACTTTTTTGAGGACAACCTCGGCAAAAATGCCTCTGCAGTATACTATTCAGCAGCTTACCATCTTGATCCCACAACGAACATGTTCATGAATGAGTATAACACTATCGAATACAGTGGTGATAAGGATGCCAGCCCAACCAATTATATCCGGAAGCTTAAGGAGATTCAGCAGTTTCCAGGAAATGCTGGAATATCATTGGCCATAGGGTTGCAGTGCCATTTTTCAAGTGGCGTGCCAAACATTGCATATATGAGGTCAGGTCTTGATCTTCTTGCAGCAACTGGACTTCCTATATGGCTCACAGAAACCAGTGTGGATCCTCAGCCAAATCAGAATCAAGGTGGGTTCTGA 1413 0.4176 MKVGAAELCILLFTTSCLLHFSSELQHSMPYDYSATTQCVTEPKRAQYGGGIIVNPGFDHNIKGWRVFGNGTIEERISNDENRFIVASNRRQTLDGFSQKVQLKKGMIYMFSAWFQLSEGSDIVSVVFKRNGSELVHGGHVIAKHGCWSLLKGGIVANFSSPAEILFESENPIVELWVHSVSLQPFTREQWRSHQDSSIERVRKSRVRFQVTHPNETVLEGATVVIKQTRANFPYGCAMNRHILTNSDYQKWFVSRFKYTTFTNEMKWYSTEKIQGHENYTIPDAMLKFAKENGISVRGHNILWDSERRQPEWDLSLSPDELREAAAKRMKSVVSRYKGQLIAWDVVNENVHFHFFEDNLGKNASAVYYSAAYHLDPTTNMFMNEYNTIEYSGDKDASPTNYIRKLKEIQQFPGNAGISLAIGLQCHFSSGVPNIAYMRSGLDLLAATGLPIWLTETSVDPQPNQNQGGF* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4014 470 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 220 470 IPR001000 GO:0004553|GO:0005975
Mtr1g4014 470 SMART glyco_10 266 469 IPR001000 GO:0004553|GO:0005975
Mtr1g4014 470 Pfam Glycosyl hydrolase family 10 229 463 IPR001000 GO:0004553|GO:0005975
Mtr1g4014 470 Pfam Carbohydrate binding domain 51 127 IPR003305 GO:0016798
Mtr1g4014 470 SUPERFAMILY (Trans)glycosidases 219 463 IPR017853 -
Mtr1g4014 470 SUPERFAMILY Galactose-binding domain-like 49 184 IPR008979 -
Mtr1g4014 470 PANTHER GLYCOSYL HYDROLASE 35 467 IPR044846 GO:0004553|GO:0005975
Mtr1g4014 470 Gene3D Glycosidases 222 469 - -
Mtr1g4014 470 Gene3D - 40 186 - -
Mtr1g4014 470 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 35 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4014 Mtr-Chr1 51756037 51761487 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g4014 26 464 Glycoside Hydrolase AT4G33840 53.759 2.23e-169 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4014 - - mtr:MTR_1g106770 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4014 1 51756037 51761487 Mtr1g4014 1 51756037 51761487 ECH