Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3996 ATGGTTTCAGAAGGAGAGTTAATGGTGAAGGGTTTTAGAGGGTTGAGGAAGACAAAGCTTGTGTGTACTGTTGGTCCTGCTTGTAGTTCATTGGAGGATCTAGAGAAGTTGGCATTGGGAGGAATGAATGTTGCTAGGCTTAATATGTGTCATGGTACTAGAGAATGGCACCGTGATGTTATTAGGAAGATTAAGAAGCTTAATGAGGAAAAGGGTTTCTCTGTTTCTGTTATGATTGATACTGAAGGTAGTCAGATTCATGTTGTTGATCATGGAGCACCTTCCTCGGTTAAAGTTGAGGAAGATTCAATTTGGTTGTTTACTGCTGAAAATTTTGTGGGTTCTCGACCATTCACAGTTCAAGCAAACTATCCAGGTTTTTCTGAAGGTATTGAAGTAGGTGATGAAATTGTTATAGATGGTGGAATGGCATGCTTTGTTGTCATTGAAAAAACTGGAAATGATTTGCGTTGTAAGTGCATAGATGCTGGTCTTTTCTTACCCAGAGCCAAATGTAGTTTCTGGAGAGATGGAAAGCTTGTCGGGAGGAATTACAAGCTCCCCACTCTATCAACAAAGGATTGGGCAGATATAAACTTTGGTATAGCTGAGGGTGTTGATTTTTTTGCCCTATCCTTTGTCAACCATGCTGACTCTGTTAAGGATTTAAAGAACTACCTCTCTGGAAAATCAACCAAATCCATAAAAGTATTGGCAAAGATAGAAAGCTTAGAATCCCTTCATAATCTGGAGGAAATAGTGAAAGCGTCTGATGGAATCATGGTAGCTCGAGGTGACCTTGGAGTCGAAATACCACTTGAGCAGATTCCTACAGTTCAGGAGGATATAATTCACATTTGCAGACAACAAAATAAGCCAGTGATTGTAGCTTCTCAGCTTCTTGAGTCAATGATTGAGTATCCAACACCAACTCGTGCCGAGGTAGCAGATATTTCTGAAGCAGTTCGACAGTACGCGGATGCTTTGATGTTGTCTGGTGAGTCAGCTATCGGTTCATTTGGACAGAAAGCATTGACAGTGTTGGATATGACCAGCAGTAGAATGGAATCATGGAGTAGGGAGGAAAATAGACAAAGTCTTCTCAATCACCATAAACTTGGAGCATCATTGCCAGATTGCATCACTGAGCAAATATGCAATTGTGCTGTTGAAATGGCCAACAAACTTGGTGTGGATGCCATCTTTGTTTACACAAAACATGGATATATGGCATCATTACTATCTCGCAACCGTCCAGATCCTCCCATCTTTGCTTTCACCGACGATGAAAGTACTCGAATGGCTCTGAATTTGCAATGGGGTGTTGTACCACTTCTTGTTGATTTATCAGATGATGCTGAATCAAATATCTCAAAATCTGTTCAGCTTATGAAATCTAAAGGATTAATCAACAAAGGAGATGTTGTTCTAGTGGTCTCAGATGTTGCTCCAACACGTTCAACTCCAATGGCTCTCCAATCAATTCAGGTTAAGACTATTATCTAG 1506 0.405 MVSEGELMVKGFRGLRKTKLVCTVGPACSSLEDLEKLALGGMNVARLNMCHGTREWHRDVIRKIKKLNEEKGFSVSVMIDTEGSQIHVVDHGAPSSVKVEEDSIWLFTAENFVGSRPFTVQANYPGFSEGIEVGDEIVIDGGMACFVVIEKTGNDLRCKCIDAGLFLPRAKCSFWRDGKLVGRNYKLPTLSTKDWADINFGIAEGVDFFALSFVNHADSVKDLKNYLSGKSTKSIKVLAKIESLESLHNLEEIVKASDGIMVARGDLGVEIPLEQIPTVQEDIIHICRQQNKPVIVASQLLESMIEYPTPTRAEVADISEAVRQYADALMLSGESAIGSFGQKALTVLDMTSSRMESWSREENRQSLLNHHKLGASLPDCITEQICNCAVEMANKLGVDAIFVYTKHGYMASLLSRNRPDPPIFAFTDDESTRMALNLQWGVVPLLVDLSDDAESNISKSVQLMKSKGLINKGDVVLVVSDVAPTRSTPMALQSIQVKTII* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3996 501 TIGRFAM pyruv_kin: pyruvate kinase 16 487 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr1g3996 501 SUPERFAMILY PK C-terminal domain-like 377 484 IPR036918 -
Mtr1g3996 501 ProSitePatterns Pyruvate kinase active site signature. 235 247 IPR018209 GO:0004743|GO:0006096
Mtr1g3996 501 PANTHER PYRUVATE KINASE 1 500 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr1g3996 501 SUPERFAMILY PK beta-barrel domain-like 86 172 IPR011037 -
Mtr1g3996 501 PRINTS Pyruvate kinase family signature 73 89 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr1g3996 501 PRINTS Pyruvate kinase family signature 206 220 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr1g3996 501 PRINTS Pyruvate kinase family signature 237 263 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr1g3996 501 PRINTS Pyruvate kinase family signature 264 288 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr1g3996 501 PRINTS Pyruvate kinase family signature 289 313 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr1g3996 501 PRINTS Pyruvate kinase family signature 314 332 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr1g3996 501 PRINTS Pyruvate kinase family signature 333 349 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr1g3996 501 Pfam Pyruvate kinase, barrel domain 16 357 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr1g3996 501 Pfam Pyruvate kinase, alpha/beta domain 383 482 IPR015795 -
Mtr1g3996 501 PANTHER PYRUVATE KINASE 1 500 - -
Mtr1g3996 501 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 9 359 IPR015813 GO:0003824
Mtr1g3996 501 Gene3D - 18 347 IPR040442 -
Mtr1g3996 501 Gene3D - 85 187 IPR015806 GO:0004743|GO:0006096
Mtr1g3996 501 Gene3D - 348 494 IPR036918 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3996 Mtr-Chr1 51580919 51585011 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3996 K00873 - gmx:100797214 885.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3996 1 51580919 51585011 Mtr1g3996 1 51580919 51585011 ECH