Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3838 ATGAATGAAAAAGAAAGGAAGAAACATATTAGGGAACCACCTTCAATTCCTTTCATTTGGGAAACAAAACCAGGCATTCCTATAAAAGATTGGAAGCCAGTGGACTCGTCATTTTGCCAATTACCAAAAACTCCACTCAAACAAATTGCCTCTATTCCCTTTGTTTGGGAAGAAAAACCTGGAATACCCCTCCCTAATTTCTCACATGTTGATGAGAATGAAAGCATAACTAGCTTGGACCTTGAATCATTTAGTTTTGATACAAATGAATCATTTAACTCAGTTCCTTCTTTGCTTGCAGATTGTCTTGTATCATCAACTAAACTCTCTACAGCCATTCCACTACAACAAACTCCATCCTCTCCAGCTTCGTCGGAGACGGATAGTAGCATAAGCAGCTATGAAACTGGAAGGTCAAGTTTAACTGGTTCTGCTTTTTTGGAATGTCTATTTCCTTTGTTTCCACCAAAGTCTAGTTTTCTTGAAAGGGATATTGGTTACAACGAAAAGTTAAGTTCAAGTTTGGTGGAACTAAAGGGAAATGATTTTGAGAATGAAGATTATACTTGTGATATGTCAAGGAAGCAACCAACACTTGGGGAGTTAATTATGATGAGCAGAAGAAGAAGCTGCATAAGAAAAGCAACTCAAATGAATAAATGGGATCCACCAAAGAAAACCACAAGAAAACAAGCTTTTGGATGCTTCTCCGTTGTAACAGGCAGCAGTATCATTGAAGGGCTGTTGAAGAAAAAGTACTACTACTACCCTAGGCTGAAACTAGTCTAA 789 0.379 MNEKERKKHIREPPSIPFIWETKPGIPIKDWKPVDSSFCQLPKTPLKQIASIPFVWEEKPGIPLPNFSHVDENESITSLDLESFSFDTNESFNSVPSLLADCLVSSTKLSTAIPLQQTPSSPASSETDSSISSYETGRSSLTGSAFLECLFPLFPPKSSFLERDIGYNEKLSSSLVELKGNDFENEDYTCDMSRKQPTLGELIMMSRRRSCIRKATQMNKWDPPKKTTRKQAFGCFSVVTGSSIIEGLLKKKYYYYPRLKLV* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3838 262 Pfam Protein of unknown function (DUF688) 7 42 IPR007789 -
Mtr1g3838 262 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 70 261 - -
Mtr1g3838 262 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 74 - -
Mtr1g3838 262 MobiDBLite consensus disorder prediction 114 135 - -
Mtr1g3838 262 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 70 261 - -
Mtr1g3838 262 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 74 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3838 - - gmx:100806447 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3838 1 49955894 49957142 Mtr1g3838 1 49955894 49957142 ECH