Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3836 ATGGAGAACACAGTTGTTAAAGTTCGATGTCAAAGGATTGGTTGCAATGCTATGTTCTCCGACGACGACAATCTCGATGGTTCCTGTCAATACCATGATTTGGGACCTACATTTCATGATGGTATGAAAGAATGGAGTTGCTGCAAGAAAAGAAGCCATGATTTTAGCTTATTTTTGGAAATTCCAGGTTGCAAGACAGGAAAACATACAACAGAGAAGCAAGTAATTGCACCGGCTAAGAAAAAGCCTGTGCCCCCTCCATCTGTGGCTTCCTCAACCAACGCATCCACGAAGGACTCTTGTTCTAGGTGCAGGCAAGGATTTTTTTGCTCAGATCATGCTTCACAAAGCAAACCTGTAACTATTGTTGGAGACAAATCTGAAAATCTTGCTGGAGATGCATCTGCAGAAAGCAATTCAAAAGTTGAGGTTGTGAAACCTCCTAAAAAGATAGTTGGCATAAACGAGCCTCAAATATGCAAAAATAAAGGATGTGGTCAAACCTTCAAGGAAAAGGATAACCATGACACTGCTTGCAGTTACCATCCTGGCCCTGCTGTTTTTCATGACCGAATGAGAGGGTGGAAGTGTTGTGATATTCATGTAAAAGAATTTGACGAGTTTATGAGCATTCCTCCATGCACAAAGGGATGGCATAATGCTGATCCAGAACCCTAA 678 0.4189 MENTVVKVRCQRIGCNAMFSDDDNLDGSCQYHDLGPTFHDGMKEWSCCKKRSHDFSLFLEIPGCKTGKHTTEKQVIAPAKKKPVPPPSVASSTNASTKDSCSRCRQGFFCSDHASQSKPVTIVGDKSENLAGDASAESNSKVEVVKPPKKIVGINEPQICKNKGCGQTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMSIPPCTKGWHNADPEP* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3836 225 Pfam CHORD 9 69 IPR007051 -
Mtr1g3836 225 Pfam CHORD 159 219 IPR007051 -
Mtr1g3836 225 ProSiteProfiles CHORD domain profile. 10 69 IPR007051 -
Mtr1g3836 225 PANTHER CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN RAR1 3 223 IPR043316 -
Mtr1g3836 225 MobiDBLite consensus disorder prediction 78 100 - -
Mtr1g3836 225 Gene3D - 152 222 - -
Mtr1g3836 225 Gene3D - 2 73 - -
Mtr1g3836 225 ProSiteProfiles CHORD domain profile. 160 219 IPR007051 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3836 K13458 - gmx:100194419 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3836 1 49919576 49924415 Mtr1g3836 1 49919576 49924415 ECH