Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3835 ATGCTTCCTAAATCACCTCCCCACTCGCCGGAATCACAACCGTTCAAACTCTCCACCACCAAAACCTCCTTCAAAACCACATTTCAATCACTTTTCAACCTTCAAAATCCACGAGCATGGATTTTCCTCATCTTCGTCTTCATCCAGATCCTCCTCTTCTTCAACCTCCGTAGATTCCCTGCCTCAATTCCCGCCCCTCACCACAACTTCCCCACTCGTCTCGCCGTAGTTGATGGTGGAAGAAGAATTCAAAACTACACTGTATTGGATTCTATTCCCACTATAAACAGCGATGAGTGCAGCTCCGGTAGAATTTTCGTTTATGATTTACCGAAATTCTTCAACCAAGAAATCCTAGATAATTGCGATAATCTCAATCCCTGGAGTTCTCGCTGCAACGCTCTCTCCAACGATGGATTAGGAGAAATCGCAACCGGACTCGCCGGAATCGTGCCGGAGAATCTCCTTCCATCGTGGTACTGGACAGACCAATTCGTTTCAGAAATCATCTTCCACAACCGTATGCTAAACCACAAGTGCAGAACCATGGAACCCGAATCCGCTGCGGGGTTCTATGTTCCATTCTACGTTGGACTCGCAGTGGGAAAATACTTATGGATGAACACCTCCACCGCGAAGGATCGCGATAGTCACTGCGAAAAGATGTTGATATGGCTTAATGAACAACCGTATTACAAAGAATCAAACGGTTGGGATCACTTCATTACAATGGGGCGCATCACATGGGATTTTCGTCGTTCCAAAGATGAAGATTGGGGTTCTAGTTGCATCTACAAGCCAGGGTTAAGAAACATCACTCGCCTTCTGATAGAGCGTAATCCATGGGACTATTTCGATATCGGTATACCTTACCCCACTGGATTCCACCCTAGTTCATTTTCCGACATTACTCGCTGGCAGAGCTTCGTCCGTAATCGCCGCCGTAAATCACTCTTCTGCTTCGCCGGAGCTCCTCGCCGCAGTTTCCGGAACGATTTCAGAGCAGTTTTGTTGAATCAATGTCGTAACTCTGGTGGCTCGTGCCACGCTGTAGACTGCGGTGGTTCAAAGTGTGCAAATGGAACATCGGCGATCACTGAAACTTTTCTTGATTCGGATTTTTGTTTGCAGCCGAGAGGGGATAGTTTCACGCGGCGGTCGATTTTCGATTGTATGGTGGCTGGTTCCATACCGGTTTTTTTCTGGCGGCGAACGGCGTATTTACAGTATCAGTGGTTTTTACCGGAAGAACCGGGGAGTTACTCGGTTTATATTGACCGGAACGCGGTTAAAAACGGGACATCCGTGAAAGCGGTGCTTGAGAGTTTCACGAAAGAAGAGGTTAGGAAAATGAGGGAGAAAGTGATTGAGTATATTCCAAGGATGGTTTATGCAAAACATAATGAAGGGATTGAAGGTGTTAAAGATGCTTTTGATTATGCTACTGAAGGGGTGTTAACAAGGTTCAAGGAACAACTACAACCTGGGTTTCATAAGTGGAAATGA 1506 0.4628 MLPKSPPHSPESQPFKLSTTKTSFKTTFQSLFNLQNPRAWIFLIFVFIQILLFFNLRRFPASIPAPHHNFPTRLAVVDGGRRIQNYTVLDSIPTINSDECSSGRIFVYDLPKFFNQEILDNCDNLNPWSSRCNALSNDGLGEIATGLAGIVPENLLPSWYWTDQFVSEIIFHNRMLNHKCRTMEPESAAGFYVPFYVGLAVGKYLWMNTSTAKDRDSHCEKMLIWLNEQPYYKESNGWDHFITMGRITWDFRRSKDEDWGSSCIYKPGLRNITRLLIERNPWDYFDIGIPYPTGFHPSSFSDITRWQSFVRNRRRKSLFCFAGAPRRSFRNDFRAVLLNQCRNSGGSCHAVDCGGSKCANGTSAITETFLDSDFCLQPRGDSFTRRSIFDCMVAGSIPVFFWRRTAYLQYQWFLPEEPGSYSVYIDRNAVKNGTSVKAVLESFTKEEVRKMREKVIEYIPRMVYAKHNEGIEGVKDAFDYATEGVLTRFKEQLQPGFHKWK* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3835 501 Pfam Exostosin family 100 437 IPR040911 -
Mtr1g3835 501 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 17 492 IPR004263 GO:0006486|GO:0016757
Mtr1g3835 501 PANTHER XYLOGLUCAN GALACTOSYLTRANSFERASE XLT2 17 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3835 Mtr-Chr1 49904760 49906601 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3835 - - gsj:114403132 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3835 1 49904760 49906601 Mtr1g3835 1 49904760 49906601 ECH