Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3812 ATGGCACAGTTTACCCCCTCAGGTAAATCTGATGATCCCACAAACGGAGAGTGCAACGAAAGTGGACTGGTCGTTTGTTTTGGTGAATTGTTGATAGATTTTGTGCCTACGGTGGGTGGAGTGTCTCTAGCCGAAGCACCTGCTTTCAAGAAAGCTCCTGGTGGTGCTCCTGCGAACGTGGCAGTTGGCATCTCTAGGTTGGGGGGTTCATCTGCATTTCTAGGGAAGGTTGGAGCAGATGAATTTGGGTATATGTTGGCTGATATTTTAAAGCAAAATAACGTGGATACATCTGGCATGCGGTTTGATTCTGATGCCAGAACCGCATTGGCTTTTGTTACACTTAGAGCTGATGGCGAGCGCGAGTTCTTGTTTTTCCGAAATCCTAGTGCTGATATGCTTCTGGATAAGTCAGAGCTTGACCATAACCTCATTGAGAAGGCTAAAATATTCCATTATGGTTCCATCAGTTTGATTGATGAACCATGCAAGTCAGCTCATCTTGCTGCCTTGAGAATTGCTAAAGACTCTGATTGCATTCTCTCATATGATCCGAATTTGAGATTGGCACTATGGCCATCAGCTGAGGCTGCTCGGAATGGTATAATGAGCATATGGGATCTAGCCGATGTCATAAAGATCAGTGAAGAGGAGATTACTTTTTTGACCGGTGGTGATGATCCTTATGATGATGATGTTGTATTAAACAAGCTTTTTCACCCTAATCTCAAACTTCTAATTGTTACCGAAGGGTCAGAGGGTTGTAGATATTACACCAAGGATTTTAAGGGCAAAGTTGAAGGTGTCAATGTTAAACCTGTTGACACAACTGGTGCTGGAGATGCATTTGTTAGTGGGATTCTCTACAACATAGCTTCTGACCCAAGTATTTTCGAGAATGAGGAGCATCTCCAGAAAGCGCTATATTTCGCAAATGTATGTGGTGCGATCACCGTGACAGAGAGAGGGGCAATTCCTGCACTACCTACAAAAGATGCTGTCCTGCAATTCGATGCAAAATAG 1023 0.4379 MAQFTPSGKSDDPTNGECNESGLVVCFGELLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFLGKVGADEFGYMLADILKQNNVDTSGMRFDSDARTALAFVTLRADGEREFLFFRNPSADMLLDKSELDHNLIEKAKIFHYGSISLIDEPCKSAHLAALRIAKDSDCILSYDPNLRLALWPSAEAARNGIMSIWDLADVIKISEEEITFLTGGDDPYDDDVVLNKLFHPNLKLLIVTEGSEGCRYYTKDFKGKVEGVNVKPVDTTGAGDAFVSGILYNIASDPSIFENEEHLQKALYFANVCGAITVTERGAIPALPTKDAVLQFDAK* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3812 340 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 54 78 IPR002173 GO:0016773
Mtr1g3812 340 Pfam pfkB family carbohydrate kinase 23 330 IPR011611 -
Mtr1g3812 340 PANTHER HEXOKINASE FAMILY MEMBER 12 338 - -
Mtr1g3812 340 PANTHER CARBOHYDRATE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 12 338 - -
Mtr1g3812 340 PRINTS Ribokinase signature 49 68 IPR002139 GO:0016301
Mtr1g3812 340 PRINTS Ribokinase signature 204 219 IPR002139 GO:0016301
Mtr1g3812 340 PRINTS Ribokinase signature 246 257 IPR002139 GO:0016301
Mtr1g3812 340 SUPERFAMILY Ribokinase-like 24 337 IPR029056 -
Mtr1g3812 340 CDD bac_FRK 23 325 - -
Mtr1g3812 340 Gene3D - 21 340 IPR029056 -
Mtr1g3812 340 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 275 288 IPR002173 GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3812 Mtr-Chr1 49674725 49678471 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3812 K00847 - gmx:100818404 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3812 1 49674725 49678471 Mtr6g1573 6 28066883 28072425 ECH
Mtr1g3812 1 49674725 49678471 Mtr1g3812 1 49674725 49678471 ECH
Mtr6g1573 6 28066883 28072425 Mtr1g3812 1 49674725 49678471 PCT