Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3802 ATGGATTGGTTCTTGGCACAATTTATATGGGTAATTCTTGCTGGAAGCTTGTTATTTAATGCCTTATCTTATTCTTATAAAGCACCAATGTACACATTTATCAAAGAAGCCACATTTGCTCCTCCAATCTTAACATATGATTATATAGTAATTGGTGGAGGAACATGTGGTTGTCCACTAGCAGCAACACTTTCACAAGGTGGAAAAGTTTTAGTCCTTGAAAGAGGAGGTTCACCATATACAAATCCAGAACAGATCAACATACATAACTTTGTTAATGCCCTTTTTAATATAAGTCCTTCATCATTTTCACAAGTATTCATATCAACCGATGGTGTATACAATACGCGTGCACGTGTCTTAGGCGGCGGTTCTGTCGTGGGTGCTGGATTCTACTCAAGGGCTAGTTATAAGTACATAAGAGAATTTGGTTGGAATGAAACTTTGGCCAGGAGTTCATACGAGTGGGTTGAAAAGAAGGTTGTTTTTGAGCCTTCAATGCTTCAATGGCAATCAGCAGTTAGGGACGGTTTACTTGAAGCAGGGATTTTGCCTTACAACGGTTTTACATTTGATCATGTATATGGGACTAAGGTTGGAGGGACAATTTTCGATAAGGAAGGTCATAAACACACTGCAGCTGATTTGTTAGAGTATGCCGATCCAAAGAGAATTTCTGTTTATTTGCATGCCACAGTTCAAAAGATACTATTCAAGTGGAATGCAGAAAAAGGGAGGCCACAAGCTTATGGAGTGATTTTCAAAGATACATTAGGAATCATACATAGAGCATACATAATCTCCAAAGTGGATAATGAAATAATTGTATCAGCTGGTGCAATTGGAAGTCCACAGTTACTGATGCTGAGTGGCATTGGTCCTGCTAACCATCTTAAGGCGCTTGGAATCCAGGTGGTTATGGATCAGCCTTTTGTTGGTCAAGGGATGGCAGATAGTCCAAAAAATGTTCTTGTTGTTCCTTCTCCTTTACCAGTAGAACTTTCTGTGATTGAAACTGTGGGAATCACTAAGTTTGGTAGCTTCATTCAAGCACTCAGTGGATTGAGCTTTGGTTATTCTTTCTCTGACAAGCTTAGAGGGATTTTTGAATTGTTATCAAACCAGAGTGGTATATCCTCCAAGTTTAGACCAGAAACTATGGAAAGTTTTGCAGACATAATTAGATCATTAACCAATCCAATTTTCAAATTCAAAGGAGGAATGATAGTTGAAAAGGTAATGGGACCACGATCCACAGGTCACCTGGAACTTCTAACAACTAATCCCAATGATAATCCATCAGTTACCTTCAACTATTTCAAGGATCCAGAAGACTTGAGAATGTGTGTGGAAGGCATGAAAACAATCATAAATGTGATTAACTCAAAAGCATTCTCAAGATTTCGTTATAAAAACATGCCTATCCAGGCTCTTATAGACTTGATGTTGCTTTTACCAGTGAATTTGAGACCAAAACATCCTAATGCTGCATTTTCTTTAGAACAATATTGCATTGATACTGTCTCAACAATTTGGCATTATCATGGAGGTTGTCAATCTGGTAAAGTTGTTGATCATAATTATAAGGTCATTGGTGTGGAAGCTCTTAGAGTTATTGATGGGTCCACTTTTTATCGCACGCCGGGGACTAACCCTCAAGCCACTATAATGATGATTGGAAGGTATATGGGACAACAGATTATAAATAAAAGATTATCTCAATAG 1725 0.3809 MDWFLAQFIWVILAGSLLFNALSYSYKAPMYTFIKEATFAPPILTYDYIVIGGGTCGCPLAATLSQGGKVLVLERGGSPYTNPEQINIHNFVNALFNISPSSFSQVFISTDGVYNTRARVLGGGSVVGAGFYSRASYKYIREFGWNETLARSSYEWVEKKVVFEPSMLQWQSAVRDGLLEAGILPYNGFTFDHVYGTKVGGTIFDKEGHKHTAADLLEYADPKRISVYLHATVQKILFKWNAEKGRPQAYGVIFKDTLGIIHRAYIISKVDNEIIVSAGAIGSPQLLMLSGIGPANHLKALGIQVVMDQPFVGQGMADSPKNVLVVPSPLPVELSVIETVGITKFGSFIQALSGLSFGYSFSDKLRGIFELLSNQSGISSKFRPETMESFADIIRSLTNPIFKFKGGMIVEKVMGPRSTGHLELLTTNPNDNPSVTFNYFKDPEDLRMCVEGMKTIINVINSKAFSRFRYKNMPIQALIDLMLLLPVNLRPKHPNAAFSLEQYCIDTVSTIWHYHGGCQSGKVVDHNYKVIGVEALRVIDGSTFYRTPGTNPQATIMMIGRYMGQQIINKRLSQ* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3802 574 Gene3D - 46 560 IPR036188 -
Mtr1g3802 574 PIRSF Alcohol_oxidase 30 574 IPR012132 GO:0050660
Mtr1g3802 574 PANTHER OSJNBA0019K04.7 PROTEIN 4 571 - -
Mtr1g3802 574 Gene3D - 163 510 - -
Mtr1g3802 574 ProSitePatterns GMC oxidoreductases signature 2. 279 293 IPR000172 GO:0016614|GO:0050660
Mtr1g3802 574 Pfam GMC oxidoreductase 416 561 IPR007867 GO:0016614
Mtr1g3802 574 Pfam GMC oxidoreductase 46 319 IPR000172 GO:0016614|GO:0050660
Mtr1g3802 574 SUPERFAMILY FAD/NAD(P)-binding domain 44 571 IPR036188 -
Mtr1g3802 574 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 4 571 - -
Mtr1g3802 574 SUPERFAMILY FAD-linked reductases, C-terminal domain 322 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3802 Mtr-Chr1 49589692 49593209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3802 7 571 Miscellaneous Gene Families AT5G51950 57.692 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3802 - - gmx:100780453 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3802 1 49589692 49593209 Mtr1g3802 1 49589692 49593209 ECH