Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3801 ATGGGTTCGTCTAGAGGTGATTCAGCATCATGGTATTGTGCAATAGCGTTATTGGGCATGATATTATTGGGATCAATAAGAGAAAGTACTGTGGCTGAATTACAAGTTAGAGGGAATAGCCTTGGTGATCACAAAGCATGTGATGAGATATATGTTGTGGGAGAAGGTGAAACACTCAACACAATCAGTGAAAAGTGTGGTGACCCGTTTATTGTAGAGAGGAATCCACATATCCATGATCCAGATGATGTTTTCCCTGGTCTTGTTATCAGAATTATCACTCCCACCAATACTAGGAAATTGTTGAAGACCTAG 315 0.4032 MGSSRGDSASWYCAIALLGMILLGSIRESTVAELQVRGNSLGDHKACDEIYVVGEGETLNTISEKCGDPFIVERNPHIHDPDDVFPGLVIRIITPTNTRKLLKT* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3801 104 Gene3D LysM domain 43 101 IPR036779 -
Mtr1g3801 104 CDD LysM 50 92 IPR018392 -
Mtr1g3801 104 Pfam LysM domain 51 92 IPR018392 -
Mtr1g3801 104 PANTHER PROTEIN, PUTATIVE-RELATED 6 100 - -
Mtr1g3801 104 PANTHER EMBRYO SAC 1 6 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3801 Mtr-Chr1 49569507 49582218 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3801 - - qsu:112037248 148.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3801 1 49569507 49582218 Mtr1g3801 1 49569507 49582218 ECH