Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3792 ATGATGAAGATGAAGAACGTGACGAATCATAATGGAGGTTCGGTTCCCGAACCTAGAGGCTTGGAGTGGGAGATGAGACCAGGAGGGATGTTAGTTCAACGCCGAACCTTAGACTCGGATCGAGACTCGGTTCCTCCACCGACAATTAGAATTAAGGTTAAATTTGGTTCCACCTATCATGAAGTCAACATTAGTTCACAAGCAACGTTTGGTGAATTGAAGAAAATGTTAACCGGTCCAACTGGGTTACACCACCAAGACCAAAAAATATTTTATAAAAACAAGGAGAGGGATTCAAAGGCATTTCTTGACATAGTAGGAGTTAAAGATAAATCAAAGTTAGTGGTGATGGAGGATCCTATTGCTCAAGAGAAGAGGTACTTGGAAATGAGAAAGAATATAAAGATGGAAAGGGCTGCAAAATCTATTTCAGAAATTAGCTTGGAAGTAGATAGGCTTGCAGGGCAGGTGTCTGCTCTTGAAACAATAATTAGTAAAGGTGGGAAAGTTGTGGAGACAGATGTGCTTAGTTTGATTGAGAAATTGATGAATCAATTGCTTAAGCTGGATGGTATAGTGGCTGATGGGGATGTTAAATTGCAGAGGAAAATGCAGGTAAAAAGAGTACAAAAGTATGTTGAAACTTTGGATATGTTGAAAATTAAGAATTCTAATGGAGGTCATGTCCCAAAGAAGAAGCCTCAACAAAAAGTAAAATTGCCTCCAATTGATGAGCAACTAGAAGGAATGTCTATTGGGAATCATAAATTACAACCAAGTTTGGAGCAACAGTCACAAAGGAACTCAAACGGGAATTCTCAAGTATTTCAGCAGCTGCAGCACAAACCCTCTACGAATTCTACCTCAGAAGTTGTAGTTACTACAAAATGGGAGACATTTGATTCTCTACCACCATTAATTCCTGTCACTTCAGCATCCTCATCAAGCTCATCCACTAATAATTCAGTTCATCCCAAATTCAAATGGGAACACTTCGAGTAA 1002 0.3922 MMKMKNVTNHNGGSVPEPRGLEWEMRPGGMLVQRRTLDSDRDSVPPPTIRIKVKFGSTYHEVNISSQATFGELKKMLTGPTGLHHQDQKIFYKNKERDSKAFLDIVGVKDKSKLVVMEDPIAQEKRYLEMRKNIKMERAAKSISEISLEVDRLAGQVSALETIISKGGKVVETDVLSLIEKLMNQLLKLDGIVADGDVKLQRKMQVKRVQKYVETLDMLKIKNSNGGHVPKKKPQQKVKLPPIDEQLEGMSIGNHKLQPSLEQQSQRNSNGNSQVFQQLQHKPSTNSTSEVVVTTKWETFDSLPPLIPVTSASSSSSSTNNSVHPKFKWEHFE* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3792 333 MobiDBLite consensus disorder prediction 306 325 - -
Mtr1g3792 333 ProSiteProfiles BAG domain profile. 142 220 IPR003103 GO:0051087
Mtr1g3792 333 SUPERFAMILY BAG domain 102 224 IPR036533 GO:0051087
Mtr1g3792 333 CDD Ubl_AtBAG1_like 48 117 - -
Mtr1g3792 333 Pfam BAG domain 143 218 IPR003103 GO:0051087
Mtr1g3792 333 MobiDBLite consensus disorder prediction 259 290 - -
Mtr1g3792 333 SMART BAG_1 142 220 IPR003103 GO:0051087
Mtr1g3792 333 PANTHER BCL2-ASSOCIATED ATHANOGENE 11 317 IPR039773 GO:0051087
Mtr1g3792 333 ProSiteProfiles Ubiquitin domain profile. 47 117 IPR000626 GO:0005515
Mtr1g3792 333 MobiDBLite consensus disorder prediction 303 333 - -
Mtr1g3792 333 PANTHER BAG FAMILY MOLECULAR CHAPERONE REGULATOR 1 11 317 - -
Mtr1g3792 333 MobiDBLite consensus disorder prediction 1 22 - -
Mtr1g3792 333 Gene3D BAG domain 119 224 IPR036533 GO:0051087
Mtr1g3792 333 Gene3D - 48 118 - -
Mtr1g3792 333 SUPERFAMILY Ubiquitin-like 38 122 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3792 Mtr-Chr1 49466947 49469908 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3792 - - mtr:MTR_1g101440 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3792 1 49466947 49469908 Mtr1g3792 1 49466947 49469908 ECH