Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3788 ATGGATCCATCATCTTATTCACGTAACAACAAATTTCCCAGACCTTCATCAATGAGAAAACCTCACCTCTACTTCCTCATCGCTTTCCTCTGTGCTGCCTTTTATCTCCTAGGCGCTTATCAACAACGTGCTTCTTTCACCTCCCTCACGAAAAAAGCCATCATAACATCACCATCATGCACCATCCAACAAGTCAATAAACCCACCCTCGATTTCCAATCTCACCATAACTCCTCCGATACCATCATCGCACTTTCATCCGAAACCTTTAACTTCCCTCGTTGTGGCGTGAATTTCACAGAATACACACCATGTGAGGATCCGACTAGATCTTTGAGGTATAAGCGGAGTAGAATGATTTATAGGGAAAGACACTGTCCGGTTAAAGGGGAAGAGGATCTGAAGTGTAGGGTTCCTCCACCTCATGGTTACAAGACTCCTTTTACTTGGCCGGCTAGTAGGGATGTTGCTTGGTATGCTAATGTCCCTCACCGTGAACTCACTGTTGAAAAAGCTGTTCAGAATTGGATCCGGTACGACGGTGATCGGTTCTTTTTTCCCGGCGGTGGAACCATGTTCCCTAATGGAGCTGGTGCATATATTGATGATATAGGAAAGTTGATAAATCTCAAAGATGGTTCTATTAGGACTGCACTTGATACTGGCTGTGGGGTTGCTAGCTGGGGAGCATATCTTCAGTCACGTAACATAATTACATTATCACTTGCACCAAGAGATACACATGAAGCACAAGTTCAGTTTGCTCTAGAACGTGGTGTTCCTGCATTGATTGGTGTCCTAGCTTCCAAGAGGTTACCTTTCCCTTCAAGAGCTTTTGATATCTCCCACTGCTCTCGCTGCCTAATTCCATGGGCTGAATATGATGGCATCTTTCTAAATGAAGTCGATCGAGTTTTACGCCCTGGTGGTTATTGGATTTTATCTGGACCACCAATTAATTGGAATAAACACCATAGAGGGTGGCAAAGAACCAAAAAGGACTTGAATCAAGAGCAGACTAAAATTGAAAAAGTTGCTAAAAGTCTTTGCTGGAATAAGCTTATCGAGAAAGATGATATTGCAATTTGGCAAAAACCTATAAACCATTTGGATTGCAGATCTGCTCGTAAGCTCGCCACAGACCGTCCTTTTTGTGGTCCACAAGAAAATCCGGACAAGGCCTGGTATACTGATTTGAAAACATGTTTGATGCCTGTTCCTCAAGTGTCAAACAAAGAAGAAACCGCTGGTGGAGTATTGAAAAATTGGCCACAGAGACTTGAGTCAGTTCCACCTAGGATTCACATGGGTACTATTGAAGGGGTAACTTCTGAAGGTTATTCAAAAGATAACGAGCTTTGGAAGAAAAGGATTCCACATTACAAAAAAGTGAACAATCAGCTTGGAACCAAGAGATATCGTAACCTTGTGGATATGAATGCTAACTTGGGTGGATTTGCATCTGCTTTAGTTAAGAATCCTGTTTGGGTTATGAATGTGGTTCCTGTCCAGGCTAAGGTTGACACCCTTGGGGCAATATATGAAAGGGGACTGATTGGAACATATCATGATTGGTGTGAAGCAATGTCCACTTATCCAAGAACCTATGATTTAATTCATGCTGATTCACTATTCAGCCTTTACAATGGCAGATGTGAATTGGAAGACATTATGCTAGAAATGGATAGGATTCTGAGACCAGAAGGAGCAATAATAATAAGAGATGATGTTGATGTGTTATTGAAAGTAAAGAACATTGCAAATGGATTGGAATGGGATAGTTCAATTGTTGACCATGAAGATGGACCACTTGAGAGAGAGAAGCTTCTATTTGCTGTCAAGAAGTATTGGACTGCTCCTGCTCCTGCTCCTGCTCCTTCCCACAGGCGTCGCAAGACTAATTAA 1905 0.4226 MDPSSYSRNNKFPRPSSMRKPHLYFLIAFLCAAFYLLGAYQQRASFTSLTKKAIITSPSCTIQQVNKPTLDFQSHHNSSDTIIALSSETFNFPRCGVNFTEYTPCEDPTRSLRYKRSRMIYRERHCPVKGEEDLKCRVPPPHGYKTPFTWPASRDVAWYANVPHRELTVEKAVQNWIRYDGDRFFFPGGGTMFPNGAGAYIDDIGKLINLKDGSIRTALDTGCGVASWGAYLQSRNIITLSLAPRDTHEAQVQFALERGVPALIGVLASKRLPFPSRAFDISHCSRCLIPWAEYDGIFLNEVDRVLRPGGYWILSGPPINWNKHHRGWQRTKKDLNQEQTKIEKVAKSLCWNKLIEKDDIAIWQKPINHLDCRSARKLATDRPFCGPQENPDKAWYTDLKTCLMPVPQVSNKEETAGGVLKNWPQRLESVPPRIHMGTIEGVTSEGYSKDNELWKKRIPHYKKVNNQLGTKRYRNLVDMNANLGGFASALVKNPVWVMNVVPVQAKVDTLGAIYERGLIGTYHDWCEAMSTYPRTYDLIHADSLFSLYNGRCELEDIMLEMDRILRPEGAIIIRDDVDVLLKVKNIANGLEWDSSIVDHEDGPLEREKLLFAVKKYWTAPAPAPAPSHRRRKTN* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3788 634 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 13 621 IPR004159 GO:0008168
Mtr1g3788 634 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 101 614 IPR004159 GO:0008168
Mtr1g3788 634 Gene3D Vaccinia Virus protein VP39 198 378 IPR029063 -
Mtr1g3788 634 PANTHER METHYLTRANSFERASE PMT20-RELATED 13 621 - -
Mtr1g3788 634 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 327 IPR029063 -
Mtr1g3788 634 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 460 578 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3788 Mtr-Chr1 49429196 49433073 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3788 - - gmx:100814235 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3788 1 49429196 49433073 Mtr6g1481 6 24706025 24713996 ECH
Mtr1g3788 1 49429196 49433073 Mtr1g3788 1 49429196 49433073 ECH