Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3767 ATGGTTAAGTTAACTATAGTTGGAAGGGCAAACGATGGATTACCTCTAGCACAAGGACTAAGATATGTAAATGAAGAAAATGGTTATCTTTCACGATACAGGCAACAGGCAGAATTTATACTCCAAGAAATTTCAAAAGGAGCATTGACACCTTCCATGATGACCATTCTCATTGACCATTGCTGCTTCAACTTCTTGGTAGAGAATGGAGTTGTTTACATTGTTTTGTGCGAGTCCACGTACCCAAGAAAACTAGCATTTAATTACTTACAAGACATACAAAAAGAGTTTGAGAAGTTTGATAAAACCCTCATAGGCAAAATTACAAGGCCATACAGCTTTGTCAAATTCGATGGTATAATTGCAAACTTTAGCAGACAATACATTGATACAAGAACTCAGGCCAACCTATCAAAACTTAATATCAATAAGAAACAAGAGTTAAACATTATTACAGAAGAAATATCCATCATCTTAGAAAGAAGGAGAATTTCAGAAACAATGAGAATGTTACCCGTTAGTCCTCAAAATTCAGCCTCCTCAATATGGTGTTCCCCAAGCCTTGAGGTGATTGCTATGAAATGGACACCAATTTTGATCATGGTCATTACATCTATTGCTCTTCTAGGGGCTGGTTTAGTCCTCACAGATGACTATATTATTTCAGGATGA 672 0.3631 MVKLTIVGRANDGLPLAQGLRYVNEENGYLSRYRQQAEFILQEISKGALTPSMMTILIDHCCFNFLVENGVVYIVLCESTYPRKLAFNYLQDIQKEFEKFDKTLIGKITRPYSFVKFDGIIANFSRQYIDTRTQANLSKLNINKKQELNIITEEISIILERRRISETMRMLPVSPQNSASSIWCSPSLEVIAMKWTPILIMVITSIALLGAGLVLTDDYIISG* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3767 223 CDD Longin 5 128 IPR010908 -
Mtr1g3767 223 PANTHER VESICLE-TRAFFICKING PROTEIN SEC22B 1 222 IPR044565 GO:0005484|GO:0006888|GO:0006890
Mtr1g3767 223 Pfam Regulated-SNARE-like domain 37 118 IPR010908 -
Mtr1g3767 223 SUPERFAMILY SNARE-like 1 128 IPR011012 -
Mtr1g3767 223 PANTHER SNARE-LIKE SUPERFAMILY PROTEIN 1 222 - -
Mtr1g3767 223 Gene3D Longin domain 1 129 - -
Mtr1g3767 223 ProSiteProfiles Longin domain profile. 6 121 IPR010908 -
Mtr1g3767 223 SMART Longin_2 36 120 IPR010908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3767 Mtr-Chr1 49247085 49249304 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3767 K08517 - gmx:100781527 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3767 1 49247085 49249304 Mtr1g3767 1 49247085 49249304 ECH