Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3762 ATGGATTCAAGAGTTGTTCATAGTCATGTTGAAGAGGAGAACATTGAACCACAACAAGTGACGCTTGGCGCGGAAGAAAACCTTTCTCCTGATCAAGAGAAGAAATCTGTTCTGAATAAGGTGAAGGCAAAGGCTAAGAAAATTAAGGACACAATTAAAAAACACGGTCAACAAGTACTTGATCATGGTAATGGACATAACAATGAAATTCAGCATACTCATGATGATATCGACTTGGATGAGGATAAGCAACTGGTTCAAGACCCACAAGATCATCAAGCACCAATTTATGACAGTGAAGATGTCAAAAGTGCTACACCTACACCTACACCAACATCCGAGCAAGATGAAAATTTAGGAAATTCAGGAATTGATATTGAAGGTACGGGAGAAGAATCCTCTCATGATCCACGGGTTGAAGGTGTTTCATCAACCACCGAAATCGATCGAAACATGTCCACTGACCAGGCCAAAACATTTACTGTGGAAGAGAAGCCAGAGCAATACAAGGCCAATTTGGAGACGCCAACAGTCTTGGAGGAAGATTCTCAAGAACAAGGAAGTAGAACCGAGGAATATACTCTTCCCAATTATCAAACCAAAGAAACTGATCCAAGTGGTGCAGAAAGTGATGAAATAAAAGACATTACACCACTCGAGGAATCTCTCGAGAGAATGAATGTGCATGATGAGTCAAAACCTACCACAGAACCAAAAATCCAGTCATCTGTTGTCGACATTGAATACCCTCCTGCTGAGGCATATACTCTTCCCAATTATCAAATCAAAGACACTGATCCAAGTGGGGAAGATGAAAGAAAAGACATTAAACCACTTGAGGAATCTCTTGAGAGAATGAATGTGCATGATGATGAGCCAAAACCTACCACAGAACGAAATATCCAGCCATCTGTTACTGACACTGAATACCCTCCTGCTGTTGGAAGCCATGATCAGTTTGTGCCACACTTCTCTGATGCAACAAAAACTCAGAATGAATATCCTAGTGAAACAGTATCCAAAGATAATAGAAACTGGGAAATTTTGGAGGAATATTCTCAAGATCAAGGAAGTAGAACTGAGGCATATACTCTTCCCAATTATCAAACCAAAGACGCTGATTCAAGTGGGAAAGGAAGTGGTGAAGTAAAAGAAACAACAGCACTTGAGGAATCTCTAGAGAGAATGAATGTGCATGATGAGCCAAAACCTACCACAGAACCAAAAATCCAGCCACCTGTTGCTGACAGTACTGAATACCCTCCTTCTTCTGGAAGCCGTGATATTGATCAGTTTGTGCCACACCTCTCTGATGCAACAGAAACTCCGAATGAATATCCTCAGGTAACAGTATCCAAAAACATCAATAGAAACCAAGAAAATCCCTTGGAAATTAGAGAAAATTTTGATACCATCACAAACACCGTTGAGAAACAATCAGGTTATGAAGAACCAGTGGAGACGCAACCAAAACAAAAAGGTTACACAGATGAAATTGAAATCTCGTCTGCGGAAGAAGCTGATAAAACTCTCCCTCCTGAAAATGACGAAGCTTCTAAGCTCGGAAATGATGAGAAAGTTGAGCATCAAAAAAGTGAGAATGGAAATAACGTTGGTTATTCTCTTACTGAGAAATTAGCTCCAGTTTATGGAAAGGTTGCAGAGGTAGGAAGTGCAGTGAAATCCAAAGTATATGGAACTAATGACGGAACTGAAACAAAAAATGGGGACAAAGGGGTCACTGTGAAGGATTACTTGGCCGAGAAGCTAAAGCCTAGTGAAGAAGATAAGGCACTTTCTGAGGTGATTTCAGAAACTTTGAATAAAGGAAAAGAAGAGCCATTGAAAAAAGAGGATGGAAAGTTGGATAGTGAGGTTGAGAAGTCTGACAAAGTGTTTGAAGAGAGCAATGTGAATAGTCCAGGAAAAGGCATGGTTGACAAGGTTAAGGATGCTGTTGGCTCTTGGTTCGTAAAATCACCACAAGGTGGAGGAATTGGTGAAGACTTATCAAAGAATAAAAAATCTGTTGGAGAAGTGGAACAAGCTGTGGATGAAGGAGGAAAACAGGAGTAA 2076 0.4041 MDSRVVHSHVEEENIEPQQVTLGAEENLSPDQEKKSVLNKVKAKAKKIKDTIKKHGQQVLDHGNGHNNEIQHTHDDIDLDEDKQLVQDPQDHQAPIYDSEDVKSATPTPTPTSEQDENLGNSGIDIEGTGEESSHDPRVEGVSSTTEIDRNMSTDQAKTFTVEEKPEQYKANLETPTVLEEDSQEQGSRTEEYTLPNYQTKETDPSGAESDEIKDITPLEESLERMNVHDESKPTTEPKIQSSVVDIEYPPAEAYTLPNYQIKDTDPSGEDERKDIKPLEESLERMNVHDDEPKPTTERNIQPSVTDTEYPPAVGSHDQFVPHFSDATKTQNEYPSETVSKDNRNWEILEEYSQDQGSRTEAYTLPNYQTKDADSSGKGSGEVKETTALEESLERMNVHDEPKPTTEPKIQPPVADSTEYPPSSGSRDIDQFVPHLSDATETPNEYPQVTVSKNINRNQENPLEIRENFDTITNTVEKQSGYEEPVETQPKQKGYTDEIEISSAEEADKTLPPENDEASKLGNDEKVEHQKSENGNNVGYSLTEKLAPVYGKVAEVGSAVKSKVYGTNDGTETKNGDKGVTVKDYLAEKLKPSEEDKALSEVISETLNKGKEEPLKKEDGKLDSEVEKSDKVFEESNVNSPGKGMVDKVKDAVGSWFVKSPQGGGIGEDLSKNKKSVGEVEQAVDEGGKQE* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3762 691 PANTHER - 1 243 - -
Mtr1g3762 691 PANTHER - 252 344 - -
Mtr1g3762 691 PANTHER - 349 691 - -
Mtr1g3762 691 MobiDBLite consensus disorder prediction 672 691 - -
Mtr1g3762 691 MobiDBLite consensus disorder prediction 139 159 - -
Mtr1g3762 691 MobiDBLite consensus disorder prediction 205 236 - -
Mtr1g3762 691 MobiDBLite consensus disorder prediction 384 406 - -
Mtr1g3762 691 MobiDBLite consensus disorder prediction 605 691 - -
Mtr1g3762 691 MobiDBLite consensus disorder prediction 605 634 - -
Mtr1g3762 691 MobiDBLite consensus disorder prediction 323 342 - -
Mtr1g3762 691 MobiDBLite consensus disorder prediction 177 204 - -
Mtr1g3762 691 MobiDBLite consensus disorder prediction 67 98 - -
Mtr1g3762 691 MobiDBLite consensus disorder prediction 265 297 - -
Mtr1g3762 691 MobiDBLite consensus disorder prediction 103 122 - -
Mtr1g3762 691 MobiDBLite consensus disorder prediction 490 532 - -
Mtr1g3762 691 MobiDBLite consensus disorder prediction 28 45 - -
Mtr1g3762 691 MobiDBLite consensus disorder prediction 1 539 - -
Mtr1g3762 691 Coils Coil 38 58 - -
Mtr1g3762 691 MobiDBLite consensus disorder prediction 350 382 - -
Mtr1g3762 691 MobiDBLite consensus disorder prediction 437 486 - -
Mtr1g3762 691 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 252 344 IPR037491 GO:0009737
Mtr1g3762 691 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 1 243 IPR037491 GO:0009737
Mtr1g3762 691 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 349 691 IPR037491 GO:0009737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3762 Mtr-Chr1 49193193 49197446 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3762 - - lja:Lj5g3v2013770.1 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3762 1 49193193 49197446 Mtr1g3762 1 49193193 49197446 ECH