Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr1g3754 | ATGGCTGTTAATGATGAATGTAAATTGAAGTTTCTTGAGTTAAAAGCAAAGAGAAACTATCGTTTTATTGTGTTTAAGATTGAGAATCAGGAAGTGGTACTAGAGAAACTTGGAGGTAAAGAAGAAACCTATGATGACTTTAGTGCATGTCTACCTGCTGATGAGTGTCGTTATGCAGTCTTTGATTTTGATTTCACCACTGCTGAAAACTGCATGAAAAGCAAGATTTTCTTCATTGCATGGTCTCCGGATATATCAAAGGTGAGACATAAGATGGTGTATGCTAGCACCAAGGACAGATTCAAGAGGGAACTTGATGGCATTCAAGTTGAGTTGCAAGCAACAGATCCTAGTGAAATGAGCTTTGATATCATAAAATCACGTGCACTATAA | 393 | 0.3715 | MAVNDECKLKFLELKAKRNYRFIVFKIENQEVVLEKLGGKEETYDDFSACLPADECRYAVFDFDFTTAENCMKSKIFFIAWSPDISKVRHKMVYASTKDRFKRELDGIQVELQATDPSEMSFDIIKSRAL* | 131 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr1g3754 | 130 | Pfam | Cofilin/tropomyosin-type actin-binding protein | 7 | 127 | IPR002108 | GO:0003779 | |
| Mtr1g3754 | 130 | PANTHER | COFILIN-RELATED | 1 | 130 | IPR017904 | GO:0015629|GO:0030042 | |
| Mtr1g3754 | 130 | SUPERFAMILY | Actin depolymerizing proteins | 2 | 128 | - | - | |
| Mtr1g3754 | 130 | CDD | ADF_cofilin_like | 1 | 129 | IPR017904 | GO:0015629|GO:0030042 | |
| Mtr1g3754 | 130 | Gene3D | Severin | 1 | 130 | IPR029006 | - | |
| Mtr1g3754 | 130 | PANTHER | COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN | 1 | 130 | - | - | |
| Mtr1g3754 | 130 | ProSiteProfiles | ADF-H domain profile. | 1 | 130 | IPR002108 | GO:0003779 | |
| Mtr1g3754 | 130 | SMART | adf_2 | 5 | 130 | IPR002108 | GO:0003779 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr1g3754 | Mtr-Chr1 | 49127033 | 49129356 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr1g3754 | K05765 | - | cmo:103484078 | 235.728 |
Event-related genes