Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3743 ATGGAATCCCTTTGGAAGCTTGTGTATTTGCTAGAGCCTGCACCGGTTACGCTTATCGCCACAGCTGTAGCTGTGACATTTGGAGCTGCTTTTCGAGCTCTAAATTATGGGAAAGAAATGGAGCGTAATCATCACATGTCAGAAGCATCCATTACATTGGATAGGTCTCAAGCATTGATGATCCCGGTTATGAGCTCTTTTAGCTTGGTTCTGATGTTCTACTTGTTCTCATCGGTTTCACAGTTTCTCACGGCATTTACTGCCATAGCTGCTGCGTCGTCCCTTTTCTTCGTCCTGTCTCCTTATGCTGCCTATTTGAAGTCACAGTTTGGTTTGGCTGATCCTTATGTTTCACGCTGTTGCTCAAAATCTTTTACACGAATCCAAGCAATGCTATTGTTTACATGCACTTTTACAGTAGTTGCTTGGCTTGTTTCTGGTCATTGGATACTGAACAATCTGTTGGGAATATCTATATGCATTGCATTTGTAAGCCATGTGCGTCTTCCAAACATCAAGATTTGTGCAATGCTCCTCCTTTGTTTGTTTGTATATGACATTTTCTGGGTTTTCTACTCTGAAAGATTTTTCGGGGCAAATGTCATGGTGTCTGTAGCAACACAGCAAGCATCAAATCCTATGCACACTGTTGCTAATAGTTTAAGTCTTCCTGGGTTGCAACTAATAACAAAGAAATTGGAGTTACCTGTAAAGATTGTCTTTCCACGAAATTTGTTGGGCGGTGTTGTTCCAGGACAGAGTGCATCCGACTTCATGATGCTTGGTTTAGGAGACATGGCCATCCCTGGGATGCTGCTGGCTTTGGTTCTCTGCTTTGATTATCGCAAGAGCAGGGATACAATCAATCTCACTGATTTACATTCTTCAAAGGGGCACAAATACATATGGTATGCGCTGCCTGGATATGCCATTGGCCTGGTAACTGCTTTAGCAGCTGGTGTCTTGAGTCACTCACCTCAACCTGCTCTTCTTTATCTGGTGCCTTCTACCTTGGGACCTGTAATTGTGATCTCTTGGATGAAAAATGAGCTACTCGAGTTATGGGAAGGAAACATTCCGAATGTCAATGATAAGGACCGCGAGGTGACTAGCGTTCATAAAGAGCGTTTTTTGGACAGCGAATGGCAACTGCCGATGGGGTGTGGGAGAGCAGTTTTGGCAGCTTAA 1188 0.4369 MESLWKLVYLLEPAPVTLIATAVAVTFGAAFRALNYGKEMERNHHMSEASITLDRSQALMIPVMSSFSLVLMFYLFSSVSQFLTAFTAIAAASSLFFVLSPYAAYLKSQFGLADPYVSRCCSKSFTRIQAMLLFTCTFTVVAWLVSGHWILNNLLGISICIAFVSHVRLPNIKICAMLLLCLFVYDIFWVFYSERFFGANVMVSVATQQASNPMHTVANSLSLPGLQLITKKLELPVKIVFPRNLLGGVVPGQSASDFMMLGLGDMAIPGMLLALVLCFDYRKSRDTINLTDLHSSKGHKYIWYALPGYAIGLVTALAAGVLSHSPQPALLYLVPSTLGPVIVISWMKNELLELWEGNIPNVNDKDREVTSVHKERFLDSEWQLPMGCGRAVLAA* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3743 395 SMART psh_8 49 348 IPR006639 GO:0004190|GO:0016021
Mtr1g3743 395 Pfam Signal peptide peptidase 49 358 IPR007369 GO:0004190|GO:0016021
Mtr1g3743 395 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE 3 4 363 - -
Mtr1g3743 395 PANTHER SIGNAL PEPTIDE PEPTIDASE 4 363 IPR007369 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3743 Mtr-Chr1 48997841 49002793 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3743 K09598 - gmx:100794976 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3743 1 48997841 49002793 Mtr1g3743 1 48997841 49002793 ECH