Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3740 ATGTCGATTATCTGCGGCTTGCCTCTTGTTGAGTGCGTGTATTGTTTAGCTTGCGTTCGTTGGGCGTGGAAAAGATGTCTCCACACTGCAGGCCATGATAGTGAAACTTGGGGATTTGCCGCAACACAAGAATTTGAGCCTGTCCCACGTCTTTGTCGCTATATTTTAGCTGTGTATGAAGACGATCTTCGAAACCCTCTTTGGGCGCCTCCTGGTGGCTATGGAATCAACCCTGATTGGTTATTACTTAGAAAGACGTACAAAGATACAAGAGGACGGGCTCCACCGTATATATTGTATCTTGATCATGATCATGCTGATATAGTTCTTGCTATAAGGGGACTAAATTTGGCAAGGGAAAGTGATTATGCTGTTCTGTTAGATAATAAATTGGGGAAGAGAAAGTTTGATGGGGGGTATGTTCACAATGGGCTGTTAAAGGCTGCTGGATGGGTTATGGATGCGGAGTGTGAAATTTTGAGGGAATTAGTAGAGAAGTATCCAAATTATACTCTTACTTTTGCTGGACATTCCCTTGGATCAGGAGTAGCTGCAGCATTGAGCATGGTGGTTGTGCAGAATCGAGATAGACTTGGAAATATTGAGAGGAAGAGAGTCAGGTGCTATGCTATTGCTCCTGCTAGATGTATGTCACTTAATTTGGCAGTCAGATATGCAGATGTCATAAACTCTGTCGTGCTTCAGGATGACTTTTTACCAAGGACAGCCACCCCGTTGGAAGATATATTCAAGTCTCTTTTCTGTTTGCCATGCTTATTGTGCTTAAGGTGCATGAGGGATACATGTATACCAGAGGAGAAGATGCTAAAAGATCCAAGGAGACTCTATGCACCTGGTCGCTTGTATCACATTGTTGAGAGAAAGCCTTTCAGATTGGGAAGGTTTCCTCCAGTTGTGAGAACAGCAGTGCCAGTAGATGGAAGGTTCGAGCATATCGTCCTTTCTTGCAATGCTACGTCAGATCATGCCATTATTTGGATAGAGAAAGAAGCCCAAAGGGCTTTGGATTTGATGATGGAGAAAGATAATACCATGGAAGTACCTGCAAAGCAAATCATGCAGCGTCAGAAAACAATGACAAGACACGGCCAAGAATACAAAGCTGCATTACAAAGAGCGAAAACATTAGACATTCCACATGCTTTTACGCCACCATCAGAATATGGAACTTTTGATGAGGAGGGAGAGGAGAGTTCAAGGTCAGAGGCCGAGTCTTCTGTTAGTTCAACAAATAGGAGTACGGTTAACGAAAGCTGGGATGTGTTGATTGAGCGTCTTTTTGATAAGGATGAGCATGGTCACATGGTGCTGAAGAGATGA 1341 0.4348 MSIICGLPLVECVYCLACVRWAWKRCLHTAGHDSETWGFAATQEFEPVPRLCRYILAVYEDDLRNPLWAPPGGYGINPDWLLLRKTYKDTRGRAPPYILYLDHDHADIVLAIRGLNLARESDYAVLLDNKLGKRKFDGGYVHNGLLKAAGWVMDAECEILRELVEKYPNYTLTFAGHSLGSGVAAALSMVVVQNRDRLGNIERKRVRCYAIAPARCMSLNLAVRYADVINSVVLQDDFLPRTATPLEDIFKSLFCLPCLLCLRCMRDTCIPEEKMLKDPRRLYAPGRLYHIVERKPFRLGRFPPVVRTAVPVDGRFEHIVLSCNATSDHAIIWIEKEAQRALDLMMEKDNTMEVPAKQIMQRQKTMTRHGQEYKAALQRAKTLDIPHAFTPPSEYGTFDEEGEESSRSEAESSVSSTNRSTVNESWDVLIERLFDKDEHGHMVLKR* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3740 446 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 446 - -
Mtr1g3740 446 Pfam Lipase 3 N-terminal region 9 74 IPR005592 GO:0016042
Mtr1g3740 446 CDD Lipase_3 44 241 - -
Mtr1g3740 446 Pfam Lipase (class 3) 109 243 IPR002921 GO:0006629
Mtr1g3740 446 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 446 - -
Mtr1g3740 446 SUPERFAMILY alpha/beta-Hydrolases 44 270 IPR029058 -
Mtr1g3740 446 Gene3D alpha/beta hydrolase 39 252 IPR029058 -
Mtr1g3740 446 MobiDBLite consensus disorder prediction 386 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3740 Mtr-Chr1 48971384 48975689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3740 1 446 Miscellaneous Gene Families AT3G49050 71.186 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3740 - - mtr:MTR_1g100950 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3740 1 48971384 48975689 Mtr1g3740 1 48971384 48975689 ECH