Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3727 ATGTGGCCATTCAGCAAGAAAGGAATTTCTGGTTTCTCAGGGAGTTCAACTGCTGAACAAGTCACTCATGGAATTGATGCAATTGGCCTCACTGCTATTGTTACTGGAGCATCCAGTGGTATTGGAGTTGAGACTATGCGTGTTCTTGCTTTGCGTGGTGTCCATGTGATTGTGGCTGTTAGAAATAAGGTTGCTGCTAATGATATCAAAGAAGCAATACTTAAGGAGATTCCCTCAGCTAAAATTGATGTCATGGAGTTAGATCTCAGTTCATTGGAATCTGTCAAGAAATTTGCATCCGAATTTAATTCCTCTGGTCTTCCATTGAACATCTTGATAAACAATGCAGGAATCATGTTATGCCCTTTCATGCTGTCCAAAGACAACATTGAACTGCATTTTGCTACAAACCACCTAGGTCATTTTCTCTTGACAAATCTTTTGTTGGACACAATGAAGAAAACAGCACACCAAAGTAAAAAAGAAGGAAGAATTGTTAATGTCTCCGCAAAAGCTTACATATTTGCATATCCTGAAGGAATCCGTTTTGACAAAATTAATGACCAATCAAGTTACAGCAAATGGGGTGCATATGGACAGTCAAAGCTTGCTAACATTTTACATGCCAATGAGCTTGCAAGACGCCTCAAGGATGATGGGGTGGATATCATTGTGAATTCTCTTCATCCAGGAATCATTCTCACCAATCTTTCCCGCCATATGAGTGTAATCGACGGTATAATAAAGGTGATTGGGAAACTTGTGATGAAAAATGTTCAGCAGGGGGCAGCCACTACATGCTATGTAGCATTGCACCCGCAAGTGAAGGGAGTTAGTGGTGAATATTTTTCAGAGAGTAATGTGGCAAAATTAAGATCACAGGGAAGGGACGCTGATTTGGCTAACAATCTATGGGATTTCAGCATGAATTTGATTAAGGACAAATAG 948 0.4008 MWPFSKKGISGFSGSSTAEQVTHGIDAIGLTAIVTGASSGIGVETMRVLALRGVHVIVAVRNKVAANDIKEAILKEIPSAKIDVMELDLSSLESVKKFASEFNSSGLPLNILINNAGIMLCPFMLSKDNIELHFATNHLGHFLLTNLLLDTMKKTAHQSKKEGRIVNVSAKAYIFAYPEGIRFDKINDQSSYSKWGAYGQSKLANILHANELARRLKDDGVDIIVNSLHPGIILTNLSRHMSVIDGIIKVIGKLVMKNVQQGAATTCYVALHPQVKGVSGEYFSESNVAKLRSQGRDADLANNLWDFSMNLIKDK* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3727 315 Pfam short chain dehydrogenase 31 177 IPR002347 -
Mtr1g3727 315 PANTHER RETINOL DEHYDROGENASE 2 314 - -
Mtr1g3727 315 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Mtr1g3727 315 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Mtr1g3727 315 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Mtr1g3727 315 PRINTS Glucose/ribitol dehydrogenase family signature 198 217 IPR002347 -
Mtr1g3727 315 PRINTS Glucose/ribitol dehydrogenase family signature 221 238 IPR002347 -
Mtr1g3727 315 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 31 284 IPR036291 -
Mtr1g3727 315 Gene3D - 25 315 - -
Mtr1g3727 315 PANTHER SHORT-CHAIN DEHYDROGENASE TIC 32 2 314 - -
Mtr1g3727 315 CDD retinol-DH_like_SDR_c_like 29 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3727 Mtr-Chr1 48872780 48877917 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3727 33 283 Acyl Lipid Metabolism Gene Families AT3G55310 28.897 3.55e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3727 - - gmx:100783465 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3727 1 48872780 48877917 Mtr1g3727 1 48872780 48877917 ECH