Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3716 ATGATGATGAAGAGCCACACATTCCTAAGGATCATTTTTCTTTTTATGTTTCTTGGATGGCTAACAGTTTGGATCTTGTTGCCCACAAAGGTCTACAAAAACACATGGACTCCCAAGCTAGAAATCAAGCTCAATTCTACATACTTTAGAGAGCAAGGGGTAAATATTCTGCTTTTCACATTCCCTATCATGTTCATTGGAGCTCTGGGTTGTATATATCTCCATCTTCATCGTGAGAAAACAACACAAAAGTTACCCTCCACAAGTACTGGCGCTCTAAAAAAATGTTTATGTTTCCTGAGACGTCCATTCCTGGTGATGCCTACAATTGGAATTGTTTCAGCTATGGAGCTTATTTTTGCAATCATGTTTGTTGCACTTTTGATATGGTCCCTTTACAATTACTTAAGTATCAGTTTTGCTCACCTCCATATGCACAAAGAAGGCGAAAAAGTATGGGAAGCGAAGTTCAGGAGTGTATTTTTGAGACTAGGTTACATAGGAAACATATGTTGGGCATTTTTGTTCTTTCCGGTTACAAGAGGGTCTTCCATTCTGCGTCTTGTTGGACTCACATCTGAGTCAAGCATCAAATATCATATCTGGCTTGGACAATTATCTATGGTTCTTTTTGCTGCGCACACCATAGGTTTTTTCATATATTGGGGCATCACCAATCAAATGGTTGAGGCGTTAGAGTGGAGCAAGACATATGTATCCAATGTAGCTGGAGAGATTGCAAGTTTAATAGCATTAGCTATGTGGATAACAAGCATTCCACAAATAAGGCGCAAGATGTATGAAGTATTCTTCTACACTCACCATCTCTACATTCTCTATATCTTATTCTATGCCATCCATGTTGGAGTTGAATACATGTGTATGATTGCTCCTGGGATTTTCCTATTCCTCATTGATAGACACCTTAGATTCTTACAATCTCGCCAACATGCTCGGTTACTATCAGCTCGCCTTTTACCTTGTGATGCCCTTGAGCTCAACTTCTCCAAGGATCCTAGTTTATACTATAACCCCACAAGTTTGGTGTTCATAAATGTTCCAAAGGTTTCCAAGCTGCAATGGCACCCTTTTACGGTGTCTTCTAGTTGTAATTTGGAGACGAACTGCCTTAGTGTTACAATTAAAAATGTGGGCAGCTGGTCAAACAAGCTTTATCAAGAACTTTCTTCTTCATCTTTGGATCATCTTAATGTCTCAGTTGAAGGACCCTATGGACCACATTCTGCTCAGTTTCTAAGGCATGAGCAGATTGCAATGGTGAGTGGTGGAAGTGGCATAACTCCATTTATATCTATAATCCGTGATCTCATATTTCAAAGCCAACAACAAGAATTTCAACCTCCAAAACTCCTACTTGTTTGTATTTTCAAAAACTATGTTGATCTAGCCATGTTAGATCTTATGCTTCCTGTTTCTGGTTCAACAACTCAAATTTCACAGCTTCCGTTACAAATTGAAGCTTACATCACAAGAGAAAAAGAAGAGCCTTCAAGAGATACTCAAAAACAAATCCAAACTATATGGTTTAAAACAAACCTCTCAGATTCTCCTATCTCAGCTGTATTAGGCCCAAATAACTGGTTATGGCTTGGTGCTATAATCACATCATCGTTCATCATGTTTCTCCTCCTTTTAGGAATTGTTACTCGTTACTATATTTATCCAATTGAAAATAACACAGGTGAAGTGTATAACTGGACTTCCAAGGTTATGTGGTACATGTTTCTACTATGTGCGTGTGTATGTATATGTTCTAGTGTTGTATTTCTTTGGTGTAAGAGACAGAACACTATAGAAAATAAGCAAATAATGAATGTAGAAGTTCCAACACCAACAAGATCACCAGGGTCATGGATTTATGGTTCAGAAAGAGAGCTTGAAAGCCTTCCTCATCAATCTTTGCTGCAAGCTACCAATGTACATTTTGGTGCAAGACCTGATCTCAAGAAAATTCTGTTTGAGTGTAAAGACAAAGATGTTGGAGTTATGGTTTGTGGTCCAAGAAAATTGAGACATGAAGTTGCTAAAATTTGTGCTTCTGGTTTGGCTGATAATCTTCACTTTGAGTCCATCAGTTTTAATTGGTGA 2109 0.3822 MMMKSHTFLRIIFLFMFLGWLTVWILLPTKVYKNTWTPKLEIKLNSTYFREQGVNILLFTFPIMFIGALGCIYLHLHREKTTQKLPSTSTGALKKCLCFLRRPFLVMPTIGIVSAMELIFAIMFVALLIWSLYNYLSISFAHLHMHKEGEKVWEAKFRSVFLRLGYIGNICWAFLFFPVTRGSSILRLVGLTSESSIKYHIWLGQLSMVLFAAHTIGFFIYWGITNQMVEALEWSKTYVSNVAGEIASLIALAMWITSIPQIRRKMYEVFFYTHHLYILYILFYAIHVGVEYMCMIAPGIFLFLIDRHLRFLQSRQHARLLSARLLPCDALELNFSKDPSLYYNPTSLVFINVPKVSKLQWHPFTVSSSCNLETNCLSVTIKNVGSWSNKLYQELSSSSLDHLNVSVEGPYGPHSAQFLRHEQIAMVSGGSGITPFISIIRDLIFQSQQQEFQPPKLLLVCIFKNYVDLAMLDLMLPVSGSTTQISQLPLQIEAYITREKEEPSRDTQKQIQTIWFKTNLSDSPISAVLGPNNWLWLGAIITSSFIMFLLLLGIVTRYYIYPIENNTGEVYNWTSKVMWYMFLLCACVCICSSVVFLWCKRQNTIENKQIMNVEVPTPTRSPGSWIYGSERELESLPHQSLLQATNVHFGARPDLKKILFECKDKDVGVMVCGPRKLRHEVAKICASGLADNLHFESISFNW* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3716 702 Gene3D - 607 701 IPR039261 -
Mtr1g3716 702 SFLD Ferric Reductase Domain 28 702 - -
Mtr1g3716 702 CDD NOX_Duox_like_FAD_NADP 320 498 - -
Mtr1g3716 702 Pfam FAD-binding domain 319 414 IPR013112 GO:0016491
Mtr1g3716 702 PRINTS Cytochrome B-245 heavy chain signature 242 265 IPR000778 GO:0016020|GO:0016491
Mtr1g3716 702 PRINTS Cytochrome B-245 heavy chain signature 267 287 IPR000778 GO:0016020|GO:0016491
Mtr1g3716 702 PRINTS Cytochrome B-245 heavy chain signature 618 636 IPR000778 GO:0016020|GO:0016491
Mtr1g3716 702 PANTHER FERRIC REDUCTION OXIDASE 4-RELATED 8 701 - -
Mtr1g3716 702 Pfam Ferric reductase like transmembrane component 165 283 IPR013130 -
Mtr1g3716 702 SFLD Ferric reductase subgroup (FRE) 21 702 - -
Mtr1g3716 702 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 405 477 IPR039261 -
Mtr1g3716 702 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 313 417 IPR017927 GO:0016491
Mtr1g3716 702 Pfam Ferric reductase NAD binding domain 421 686 IPR013121 GO:0016491
Mtr1g3716 702 Gene3D - 405 531 IPR039261 -
Mtr1g3716 702 PANTHER NADPH OXIDASE 8 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3716 Mtr-Chr1 48765619 48771449 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3716 2 702 Miscellaneous Gene Families AT5G23980 58.333 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3716 K00521 - gmx:112998154 1174.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3716 1 48765619 48771449 Mtr1g3716 1 48765619 48771449 ECH