Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3715 ATGTGCAGTATGATGATGAAGAGACACACAATAATATTCCTAAGAATCATTTTTCTTGTGATGTTTCTTGGGTGGCTATCTGTTTGGATCTTGTTGCCTACTAAGATTTACAAAAAGATCTGGGCTCCCATGCTACAAAACAAGTTCAATTCTACATACTTCAGAGGGCAAGGGATAAATCTCCTGTTTTTCACATTCCCTATGATGTTCATTGGAGCTCTGAGTTGTATTTATCTCCATTTTCATCAAGAAAAAATAACAGAAAAGTTGCCTTCCAGAAGCGGCGGCGCTCTAAAGAGATGTTTAGGCTTCCTGAGACGTCCATTCCTGGTTATGTCTCCAATTGGAATTGTTTCAGCTATGGAGCTTATTTTTGTACTCATGTTTGCTGCACTCTTGATATGGTCCCTTTCCAATTACTTACATACCGGTTTCGATCACCTCCGCATGCACAAACAAGATGAGAAAATATGGGAAGCAAAGTTGAGGAGTGTATCTTTGAGACTTGCTTACATAGGAAACATATGTTTGGCATTTTTGTTCTTTCCAGTCACAAGAATGTCTTCTATTCTGCCTCTTGTTGGACTCACATCTGAGTCAAGCATCAAGTATCATATCTGGCTTGGACAATTATCTATGGTTCTCTTTGCTGCTCATTCCATTGGTTTTATCATTTATTGGGCCATCACTAACCAAATGATTGAGATGCTAGAGTGGAGCAAGACATATGTATCCAATGTAGCTGGAGAGATTGCAAGTTTAATAGCATTAGCTATGTGGATAACAAGCATTCCACAAATAAGGCGCAAGATGTATGAAGTATTCTTCTACACTCACCATCTCTACATTCTCTATATCTTATTCTTTGCCATCCATGCTGGAGTTGGATCCATGTGCGTAATTGCTCCTGGGGTTTTCCTATTCCTCATTGATAGACACCTTAGATTCTTACAATCTCGCCAACATGCTCGGTTACTATCTGCTCGCCTTTTACCTTGTGATGCCCTTGAGCTCAACTTCTCCAAGAATCCTAGTTTATACTATAACCCCACAAGCTTGGTGTTCATAAATGTTCCAAAGGTTTCCAAGCTGCAATGGCACCCTTTTACAGTGACTTCTAGTTGTAATATGGAGACTAACTATCTGAGTGTTGCCATAAAAAATGTGGGTAGCTGGTCAAACAAGCTGTATCAGGAACTTTCTTCTTCATCTTTGGATCATCTTAATATTTCAGTTGAAGGACCTTACGGACCCCATACTGCACAATTTCTAAGGCATGAGCAGATTGTGATGGTGAGTGGCGGAAGTGGCGTAACTCCCTTCATATCTATAATCCGAGATCTCATATTTCAAAGCCAACAACAAGAATTCCAACCTCCAAAACTCCTACTTGTTTGTATTTTCAAAAACTACGCTGATCTAACCATGTTAGATCTTATGCTTCCTATTTCTGGTTTAAAAACTCGAATCTCTCAGCTTCAGTTACAAATTGAAGCTTACATCACAAGAGAAAAACAAGAACCTTCAAAAGATACTCAAAAACAAATCCAAACGATATGGTTTAAAACAAACCTCTCTGATTGTCCTATCTCAGCTGTATTAGGCCCAAATAACTGGTTATGGCTTGGTGCTATAATCACATCATCGTTCGTCATGTTTCTCCTCTTTTTAGGAATTGTTACTCGTTACTATATTTATCCGATTGAAAATAACTCAGGTGAAGTATATAACTGGACCTACGGGGTTATGTGGTACATGTTTTCATTTTGTTCATGTATATGTATATGTTCTAGTGTTGTTTTTCTTTGGTTGAAGAGATTAAACAAATTAGAAAATAAGCATATAATGAATGTAGAAGTTTCAACACCAGCAAGATCACCAGGGTCATGGATTTATGGTTCAGAAAGAGAGCTTGAGAGCCTTCCTCATCAATCTTTAGTGCAAGCTACCAATGTACATTTTGGCTCAAGACCTGATCTCAAGAAAATTCTGTTTGAGTGTGAAGGCAAAGATGTTGGAGTTATGACTTGTGGTCCAAGAAAAATGAGACATGAAGTTGCTAGAATATGTGCTTCTGGTTTGGCTGATAATCTTCACTTCGAATCAATCAGCTTTAATTGGTGA 2124 0.3832 MCSMMMKRHTIIFLRIIFLVMFLGWLSVWILLPTKIYKKIWAPMLQNKFNSTYFRGQGINLLFFTFPMMFIGALSCIYLHFHQEKITEKLPSRSGGALKRCLGFLRRPFLVMSPIGIVSAMELIFVLMFAALLIWSLSNYLHTGFDHLRMHKQDEKIWEAKLRSVSLRLAYIGNICLAFLFFPVTRMSSILPLVGLTSESSIKYHIWLGQLSMVLFAAHSIGFIIYWAITNQMIEMLEWSKTYVSNVAGEIASLIALAMWITSIPQIRRKMYEVFFYTHHLYILYILFFAIHAGVGSMCVIAPGVFLFLIDRHLRFLQSRQHARLLSARLLPCDALELNFSKNPSLYYNPTSLVFINVPKVSKLQWHPFTVTSSCNMETNYLSVAIKNVGSWSNKLYQELSSSSLDHLNISVEGPYGPHTAQFLRHEQIVMVSGGSGVTPFISIIRDLIFQSQQQEFQPPKLLLVCIFKNYADLTMLDLMLPISGLKTRISQLQLQIEAYITREKQEPSKDTQKQIQTIWFKTNLSDCPISAVLGPNNWLWLGAIITSSFVMFLLFLGIVTRYYIYPIENNSGEVYNWTYGVMWYMFSFCSCICICSSVVFLWLKRLNKLENKHIMNVEVSTPARSPGSWIYGSERELESLPHQSLVQATNVHFGSRPDLKKILFECEGKDVGVMTCGPRKMRHEVARICASGLADNLHFESISFNW* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3715 707 Pfam FAD-binding domain 324 419 IPR013112 GO:0016491
Mtr1g3715 707 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 318 422 IPR017927 GO:0016491
Mtr1g3715 707 Gene3D - 410 534 IPR039261 -
Mtr1g3715 707 Gene3D - 601 706 IPR039261 -
Mtr1g3715 707 SFLD Ferric Reductase Domain 33 707 - -
Mtr1g3715 707 Pfam Ferric reductase like transmembrane component 172 288 IPR013130 -
Mtr1g3715 707 SFLD Ferric reductase subgroup (FRE) 11 707 - -
Mtr1g3715 707 PRINTS Cytochrome B-245 heavy chain signature 247 270 IPR000778 GO:0016020|GO:0016491
Mtr1g3715 707 PRINTS Cytochrome B-245 heavy chain signature 272 292 IPR000778 GO:0016020|GO:0016491
Mtr1g3715 707 PRINTS Cytochrome B-245 heavy chain signature 623 641 IPR000778 GO:0016020|GO:0016491
Mtr1g3715 707 Pfam Ferric reductase NAD binding domain 426 691 IPR013121 GO:0016491
Mtr1g3715 707 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 410 485 IPR039261 -
Mtr1g3715 707 CDD NOX_Duox_like_FAD_NADP 325 503 - -
Mtr1g3715 707 PANTHER FERRIC REDUCTION OXIDASE 4-RELATED 13 706 - -
Mtr1g3715 707 PANTHER NADPH OXIDASE 13 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3715 Mtr-Chr1 48748086 48754382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3715 14 707 Miscellaneous Gene Families AT5G23980 58.060 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3715 K00521 - gmx:112998154 1104.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3715 1 48748086 48754382 Mtr1g3715 1 48748086 48754382 ECH