Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3712 ATGGCAAAAGTGACACTTCACGTGTATGACTTGACCAATGGTTCGGAGAAGACGAACAACACCGTTGTTCACATCAACAAGATCTTCAAGAATGGTATTGGTCTCGGTGGTATATTCCACGGCGCAGTTCAGGTTTATGGAGATGATGAATGGTCATTTGGATCCTGTGAGGAGGGTACTGGAGTTTTTAGTTGTCCTTCAAGGAAAAATGCAAGGTATACATATCGACAATCCCTTGTTCTAGGGAAAACAAACTACAATATTTTCATGGTAAATCAAATATTAAGGGAGCTTAGTAAAGAGTGGCCTGGAAATTCTTATGATCTCTTCTCCAAAAATTGCAATCACTTCTGTGATGAATTTTGTGCAAGACTAGGTGTGCCAAACCCTCCAGGTTGGGTTAACAGGTTTGCTAATGTTGGTGATATTACTATGGAAGTGGCTGGATGCACAGCATCACGATTCCGGCAAGCGAAAACAGAGATTGTATCAGCAAGCAAATCAGCATGTCGATTCCTTTTTTGTGTTACAAATAATGTTAAAACTGATATGGATGATTCCCCTAGAGGAGAATCTCTTGGTGTTCAAGCTGTTTGGATGAAAAAGGTTATTACCAATGGTGTAAAACCGTCTACTTCTACTAGTTCAGAAGCTGGGACTTCAAGTGAAATTGAGCCTCAACAACAAATATGA 693 0.4012 MAKVTLHVYDLTNGSEKTNNTVVHINKIFKNGIGLGGIFHGAVQVYGDDEWSFGSCEEGTGVFSCPSRKNARYTYRQSLVLGKTNYNIFMVNQILRELSKEWPGNSYDLFSKNCNHFCDEFCARLGVPNPPGWVNRFANVGDITMEVAGCTASRFRQAKTEIVSASKSACRFLFCVTNNVKTDMDDSPRGESLGVQAVWMKKVITNGVKPSTSTSSEAGTSSEIEPQQQI* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3712 230 Gene3D PPPDE domains 1 168 IPR042266 -
Mtr1g3712 230 MobiDBLite consensus disorder prediction 209 230 - -
Mtr1g3712 230 ProSiteProfiles PPPDE domain profile. 2 144 IPR008580 GO:0008233
Mtr1g3712 230 PANTHER DESUMOYLATING ISOPEPTIDASE 1 228 IPR008580 GO:0008233
Mtr1g3712 230 Pfam PPPDE putative peptidase domain 3 148 IPR008580 GO:0008233
Mtr1g3712 230 SMART DUF862_2a 2 156 IPR008580 GO:0008233
Mtr1g3712 230 PANTHER EXPRESSED PROTEIN 1 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3712 Mtr-Chr1 48734148 48735421 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3712 - - gmx:100786944 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3712 1 48734148 48735421 Mtr1g3712 1 48734148 48735421 ECH