Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3701 ATGAAGAAAGTTGTGTTAAAGTTGGAAATAAATGAAGACAAAATCAAGCAAAAAGCTATGAAAGCAGTCTCTGGCCTTTCAGGGGTTGAATCAGTTTCAATAGACATGAAAGACAAGAAAATGACCTTAATAGGAGATATTGATCCAATACGTGTAGTGGCTAAGTTAAGGAAGTTATGTCATGCAGAAATACTTTCAGTTGGACCAGCTAAAGAGGAAAAGAAAGAAGAACCTAAAAAAGATGATAAAAAGAAGGAAGATGATAAGAAAGATTCAACAATGATAATTAATCCTTTCATGCTCTATGGTACACCTACTACCTATTATAATCATCAGATGAATCCACAATACAATTCATACTACCGTGCCGTAAGCGTTGAAGAGGATCCTAATGGCTGTGTCATCATCTAA 411 0.3479 MKKVVLKLEINEDKIKQKAMKAVSGLSGVESVSIDMKDKKMTLIGDIDPIRVVAKLRKLCHAEILSVGPAKEEKKEEPKKDDKKKEDDKKDSTMIINPFMLYGTPTTYYNHQMNPQYNSYYRAVSVEEDPNGCVII* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3701 136 MobiDBLite consensus disorder prediction 67 91 - -
Mtr1g3701 136 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 136 - -
Mtr1g3701 136 Gene3D - 1 73 - -
Mtr1g3701 136 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 136 - -
Mtr1g3701 136 SUPERFAMILY HMA, heavy metal-associated domain 16 59 IPR036163 GO:0046872
Mtr1g3701 136 Pfam Heavy-metal-associated domain 14 58 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3701 Mtr-Chr1 48675494 48676665 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3701 - - var:108325259 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3701 1 48675494 48676665 Mtr1g3701 1 48675494 48676665 ECH
Mtr6g1292 6 19330500 19331605 Mtr1g3701 1 48675494 48676665 PCT
Mtr1g3701 1 48675494 48676665 Mtr6g1299 6 19486801 19488001 PCT