Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3682 ATGGACACCGATGGATTATCCCTAATCTGCAGCGGTCTCGGCGCCATTGAAGAAGATGATGAAGGCAAACGAATCGGTTATTCCAAGGGTGAATACTGTCTCGATAATTTGAAAGATTTGTTGAGGTTTTTGAGACGTGATGATCCGCAATCCCGCGATGTGTTCAAGCTAGTGTGTAAATGGAACATCGTTTCAAAGGATTTGGTACCGATTATAGAGCATTACCACCAAGATCGTAGCATGCTTCTCAATGCAGTTAAGGTTTTGGTGTTTCTTACAATGCCGATTGAACCTGGTTCGACTGAGGTATCTCAGCAGTTGGAGTATCTGTGGGACTTGAAATCTGCAGTGACTAACGGTGATGTTGTCACGGTGATAGTGTCGATTCTAGAAAAACCACTTGAGAATTTGGAACTTAATAAGTTCACGGAGGATGATTGGAAATTGGTACAATTGGTGTTTACATTATTTAGAAATATCCTAGCTGTTCAAGAAATCCCGTTGCATCTGAAATCAGCAGGATCTGCTAGTCATTTTTTATCGCTCAGAGATAAATTTCTGGACCTTTTGTTCCGCGAGAATGTGATGGATATAATCTTGGTTGTATCTCAAAATGTTGGGAGTTCTAATGTCTATCTCCGTCAGGATAACTTGCTTCTGCTCGAAATTTTTCATTACATTTTTATGGGCCAGGATCCAGAGTTGATTATCCGGGGCTATTCGAATGGATCGAAGGCGGACGAAGACTCCCAAGCTTCTCTTGATAGTCTCCAGTCCATCATGGAGGAAGAAAAGAAGAAAAGAATCATTAGTAGGCTTGGCAATATCGGTCGGCATTCACAATTCAATGCAACATTTGCACGGGTTACCATGGACGGTTCTAAAGCCGTAGTTAAGGGAAATCCTAATTCTTCTCATAATATGCATCTTAAATCACAAAATGTTACTCGGGGTCGAGCCAAAACAATTGCGTGGGATCACCCAAAGTTGCCTTCAACAACGGATACAATCTTGGAGTTGCTTCGTGGATTTGTCGATCAGTTTCTTTCTGTGGGATACAACGTTTTGATGCGATCCGTCCGTGAAGATATTGAAAAGGAACATCCTGCAGTTCAAAAAACTGACGTCGTTTTTTTCTTTCAAGTGGCTGAATTTGTCACTTCATTCCAGTTTTACAAGCATTCAACTTCAAAGATCAAGGAAGAAAGACACGCATTTGATGATAATGATGCTGATGCTTCAGATTACAGTGGTAAAATATGTGGCCCAATTGAAGCATCCTTGAATGAGTCAATGTTTCAATTAGTCATTTCAAAGTGGCGGCAGGCCTATGATGGTCTAAAGGAGACCAATGACTACATGTTTCTATCTGCAGCTGGTTCTCTTTTGAAAAACATGATTCGCATGCTGGATCTAGTACTTAAGTTGCTGCCAGAAGACTCTAAGGAGCCGCAAACAGCTCGCATTCTTCTGTACAAGTTGTTTTATGATCAGACTGAAGAAGGGATGACTCAATTTCTCTTGAATTTGATCAAAACGTTTGACACCCACAAACAATGCAAAAGTGCTCTTGCAGATTTGGTTGAAATCATTTGCAAGGTTGTAAAACTAATGGATCATCTTCAGTCTCGAGGAACATTGAGGGTGTCAAAAAAAGCAAGGAAATTGAAAAAGAAGATTTCCAGTGCAAGAGAATCAGAGAATAAACCAACTGGAGATCAGTCTTGCATTCAAAAAGAAGCTAGCATTTCTATTGACAATCAATTAGCTGAAAATCAGTTGCTGCAGAAGGAATCCATACCAAATGCAAATTCCACCGAGCAAGAAGACACCCCTCATGATAATGAACATCAAAATCTCGAGAAAGATGTGAACTCCCAAGTTCGTTTGAAACCAATGGAAAACAGAAATCTTGATGATAATGGAGATAATAATGTCAAGAGAGATGTGAACTTTGAAATTGGTGTGGAATCAGTGAGAAACACAAATCTTGATGATAATAAAAATGAAGATGTCGAGGAAGATGTGAACTCCCAAGTTGGTATGAAACCAATGGAAAACACAAATCCTGAACATCCTAATGAGGATATGTTGGATGACACTGGTGATTTTTCTGAAGATGAGCAAATAAATGCAGTTAGTGAAGTTGATTTCAATGTTTCGACGCTTGTCTCTGCCTTTGCGAATCACAGTATCATTCAGAAATTGTGTTGGTTGCTCAAGTTTTATAAAAGCAATTCCCTTGCTATAAATCATTACATAATAAGCATGTTGCGGAGAATTAGTGATGATCTTGAACTCCATCCCATGCTCTACCAGCTTTCGCTGCTCACAATTTTTTATGACATCCTTGCTGAACAAAAGTCACGCCCCTGCGAGGAATATGCAAGTATTGTTGATTTCCTCAACAGTTTGGTCAGAAAGATGCTAAAGAAAATGAAAAAGCAGCCCCTCCTATTTGTTGAAGTCCTTTTCTGGAAGACCCGAAGGGAATGCCATTACATCAATGCAGAATATTTGTTGGATGAGCTTGGCCATTTGAAAAACGAAACTAAAAATTGGAATGATACTCAAGGGGATGGGGAAATCGGTTCATCCCCAGGGAAACCATGGACTCGTAGAAGCCTAGCTGATGCACTTGGTGACGATGAAGCAGATGTTGTGATCTCTCATGACTCGAGATATCAAAACAATGGAGAAAAGCTTGATGATATTGAAGGCATTGCTTCTACCTCAGGCAGTAAGAATGACAGAGATGATAATAATGGGGAGCCATGGTTAGAAGATGAATATCAAACAGCTCCAAGGAGAAAGAAAAAACTGATTCTAGATGCTGAGTTGGAGATACAAATTAAGGATCTCTATGAGAAATTCAAAGATGACCGAAATTGCAGTCGACGTATTGCTGAAGTGCTTGATCCAGATGGTAAAATATCTACAGCTCAAATATCCAGTAAATTGAAAAAATTAGGGCTAACGATTGCATCAAGGAAAAAGAAGGGTGATGCTGATGAAACATTTTCAACAAGCCCTAATCAATTAGAAGGGGGTGGATTGGCTGGAGGTGTGAATCATACATCAGTGGAAGGAAGCCTGTTGATTCAGCACCGGCAGAAAAGAAAAAGAGTCAGTGCTTTCAATGAAGATCAGGAAGCTCGTATCAAAGTTCTATTTGAGGATTTCAAGGACCATAGAAGATGTAGCTATATGATAGCTAATGCACTGGACAAGGATGGTAAATTCACTCCTGCCCAAGTCTCTCGAAAACTTAAGCAACTTGGCTTATGTGTTCCTCAAAAGAGTTTTAGAGGAAAAAACCACCAAAAGGGTGAGGATCTTATGGATGGTTCAAATGATAGAATGCATGAATCTGATGAGGACACATTGATATCATTGGTAAAAAGGAAAAAAGGGAAGAATAGAAAAGAATCAAGCGAACAGTTACGAGAACAGACCAATGAGGATAAATTATCAAAAGATGATTCTGATGATGAAATGCTCGCCTCTATCCTAAAGAAAAAAGGGAAGAATAGAAACATATCAAGCGAACAGTTACAAGAACAGACCGGTGAGGATAAATTATCAAAAGATGATTCCGATGATGAAATACTTGGTTCTATCCTCAAGAAAAAAGTGAAGAATAGAAAAGAATCAAGGAAACAGTTACAAGAACAGACCGGTGAGGATAAATTATCAAAAGATGATTTGGATGAAGAAATACTTGGCTCTATCCTCAAGAAAAAAAGGAATGGATCAGTATCCAGTGATTATTTACATGAAAGCACCAATGAGGATGAATTGTCCAGAGATGATTCTGAGGATGAAATGCTTCAATCTGCACCAAATGAAAATCAAGGAGGTTTCGTGAATTCCCACCAAGTAGAAAATATGCAAGTGGATCCTGACTTGGAAGATTCAGAGGATGAAGTGGCTGTTGATACACTCCCTGACAATGCTGTATCCAGAAGGAAGCTGAGAATGGTGGTTGATCTTGAGGATGATGACTGA 4008 0.3942 MDTDGLSLICSGLGAIEEDDEGKRIGYSKGEYCLDNLKDLLRFLRRDDPQSRDVFKLVCKWNIVSKDLVPIIEHYHQDRSMLLNAVKVLVFLTMPIEPGSTEVSQQLEYLWDLKSAVTNGDVVTVIVSILEKPLENLELNKFTEDDWKLVQLVFTLFRNILAVQEIPLHLKSAGSASHFLSLRDKFLDLLFRENVMDIILVVSQNVGSSNVYLRQDNLLLLEIFHYIFMGQDPELIIRGYSNGSKADEDSQASLDSLQSIMEEEKKKRIISRLGNIGRHSQFNATFARVTMDGSKAVVKGNPNSSHNMHLKSQNVTRGRAKTIAWDHPKLPSTTDTILELLRGFVDQFLSVGYNVLMRSVREDIEKEHPAVQKTDVVFFFQVAEFVTSFQFYKHSTSKIKEERHAFDDNDADASDYSGKICGPIEASLNESMFQLVISKWRQAYDGLKETNDYMFLSAAGSLLKNMIRMLDLVLKLLPEDSKEPQTARILLYKLFYDQTEEGMTQFLLNLIKTFDTHKQCKSALADLVEIICKVVKLMDHLQSRGTLRVSKKARKLKKKISSARESENKPTGDQSCIQKEASISIDNQLAENQLLQKESIPNANSTEQEDTPHDNEHQNLEKDVNSQVRLKPMENRNLDDNGDNNVKRDVNFEIGVESVRNTNLDDNKNEDVEEDVNSQVGMKPMENTNPEHPNEDMLDDTGDFSEDEQINAVSEVDFNVSTLVSAFANHSIIQKLCWLLKFYKSNSLAINHYIISMLRRISDDLELHPMLYQLSLLTIFYDILAEQKSRPCEEYASIVDFLNSLVRKMLKKMKKQPLLFVEVLFWKTRRECHYINAEYLLDELGHLKNETKNWNDTQGDGEIGSSPGKPWTRRSLADALGDDEADVVISHDSRYQNNGEKLDDIEGIASTSGSKNDRDDNNGEPWLEDEYQTAPRRKKKLILDAELEIQIKDLYEKFKDDRNCSRRIAEVLDPDGKISTAQISSKLKKLGLTIASRKKKGDADETFSTSPNQLEGGGLAGGVNHTSVEGSLLIQHRQKRKRVSAFNEDQEARIKVLFEDFKDHRRCSYMIANALDKDGKFTPAQVSRKLKQLGLCVPQKSFRGKNHQKGEDLMDGSNDRMHESDEDTLISLVKRKKGKNRKESSEQLREQTNEDKLSKDDSDDEMLASILKKKGKNRNISSEQLQEQTGEDKLSKDDSDDEILGSILKKKVKNRKESRKQLQEQTGEDKLSKDDLDEEILGSILKKKRNGSVSSDYLHESTNEDELSRDDSEDEMLQSAPNENQGGFVNSHQVENMQVDPDLEDSEDEVAVDTLPDNAVSRRKLRMVVDLEDDD* 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3682 1335 PANTHER TIMEOUT/TIMELESS-2 1 1254 IPR044998 -
Mtr1g3682 1335 Coils Coil 1208 1228 - -
Mtr1g3682 1335 MobiDBLite consensus disorder prediction 1104 1180 - -
Mtr1g3682 1335 MobiDBLite consensus disorder prediction 1101 1292 - -
Mtr1g3682 1335 MobiDBLite consensus disorder prediction 1278 1292 - -
Mtr1g3682 1335 MobiDBLite consensus disorder prediction 1189 1245 - -
Mtr1g3682 1335 MobiDBLite consensus disorder prediction 603 647 - -
Mtr1g3682 1335 MobiDBLite consensus disorder prediction 663 695 - -
Mtr1g3682 1335 MobiDBLite consensus disorder prediction 609 647 - -
Mtr1g3682 1335 MobiDBLite consensus disorder prediction 663 677 - -
Mtr1g3682 1335 Pfam Timeless protein 27 287 IPR006906 -
Mtr1g3682 1335 PANTHER PROTEIN TIMELESS HOMOLOG 1 1254 - -
Mtr1g3682 1335 MobiDBLite consensus disorder prediction 888 933 - -
Mtr1g3682 1335 MobiDBLite consensus disorder prediction 557 577 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3682 K03155 - gmx:100796385 1657.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3682 1 48503192 48514383 Mtr1g3682 1 48503192 48514383 ECH