Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3681 ATGTCTCAGGTTCGATCCATTCAAACCTCCTTCTCACGCCCCACTTCAGGATCTACACATGACAGGTCTCAAACCTTGTTAAAGCCTCCATCTTTTTCCTCCAAAATCTTCCCACCTAAGTCTAACAATCCCCCCAAGCTTTGCTTCACAACCTCCCCCATCAATGCAAGAAAGTCCTCATCTGCTGAAGTTGTCCCTGTCTCACCCGAAGACGATTCAAAGATTGAAGAGGAGTTGCAGAAGTTACACGTTTTGCAACAAGTTGGTAATGTTTCTGGTGGAATCTGGTCTAAGCCAATGATTAAAAGAAAGACTAAGATTGTTTGTACTATTGGTCCTTCTACTAATACAAAGGAAATGATTTGGAAACTTGCTGAGGCTGGAATGAATGTTGCTCGTATGAATATGTCTCATGGTGATCATGCTTCTCATAAGAAAGTTATTGATTTGGTGAAAGAGTATAATGCACAATCTAAAGATAATGTTATTGCAATCATGCTTGACACCAAGGGTCCTGAGGTTAGGAGTGGGGATTTACCACAACCAATCATGTTAAAAACTGGCCAGGAATTCACTTTTACTATCCAGAGCGGTGTTGGAACTGCTGATTGTGTCAGCGTGAACTATGATGATTTTGTCAACGATGTTGAAGAAGGGGACATGCTTCTTGTTGATGGTGGTATGATGTCGTTCTTGGTTAAGTCCAAGACAGCGGATTCCGTGAAATGCGAAGTTATTGATGGAGGAGAGCTCGCGTCACGGAGGCATTTGAATGTTAGAGGAAAAAGTGCAACACTGCCTTCAATCACTGAAAAGGATTGGGATGACATCAAATTTGGAGTCGATAATGAAGTTGATTTCTATGCCGTTTCTTTCGTTAAGGATGCACAAGTAGTTCATGAGCTGAAGAATTATTTGAAAAGCTGTGGTGCTGATATACATGTAATTGTAAAAATTGAAAGTGCAGACTCTATACCGAACTTGCATTCAATTATTACTGCATCTGATGGGGCTATGGTTGCAAGAGGAGATCTTGGTGCAGAACTCCCTATTGAGGAGGTTCCGCTTTTGCAGGAAGAGATAATAAGGATATGCCGTAGCATGGGAAAGGCCGTTATTGTAGCCACAAATATGCTGGAAAGTATGATTGTTCACCCCACGCCAACCAGAGCAGAGGTATCTGATATTGCAATTGCTGTTCGAGAAGGTTCCGATGGAATAATGCTTTCTGGAGAAACTGCACATGGAAAGTTTCCAATTAAAGCTGCGAAAGTAATGCACACCGTAGCATTACGGACAGAAGCCGCTTTACCAAATGGGCAGATGCCACCTAATATTGGCCAAGTATTCAAGAACCACATGAGCGAGATGTTTGCATACCATGCAACCATGATGTCCAATACCCTTGGAACATCAACTGTTGTCTTCACTAGATCGGGTTTCATGGCTATTCTATTGAGCCATTATCGACCTGCAGGCACCATATTTGCTTTTACTGATCAGAAAAGGGTACAACAGAGGTTGGCTTTGTATCAAGGTGTCTGTCCTATTTACATGGAATTCTCTGATGATGCTGAAGAGACATTCACAAAAGCCTTGGATTTGTTGCAGAAGAATGGAATGGTTAAAGAAGGAGAAGAAGTAGCCCTTGTACAAAGTGGAAGGCAACCTATATGGAGGTTCCATTCCACTCACAATATTCAGGTCCGAACAGTAGCTGCCACAAATTAA 1731 0.4206 MSQVRSIQTSFSRPTSGSTHDRSQTLLKPPSFSSKIFPPKSNNPPKLCFTTSPINARKSSSAEVVPVSPEDDSKIEEELQKLHVLQQVGNVSGGIWSKPMIKRKTKIVCTIGPSTNTKEMIWKLAEAGMNVARMNMSHGDHASHKKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPIMLKTGQEFTFTIQSGVGTADCVSVNYDDFVNDVEEGDMLLVDGGMMSFLVKSKTADSVKCEVIDGGELASRRHLNVRGKSATLPSITEKDWDDIKFGVDNEVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRICRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPIKAAKVMHTVALRTEAALPNGQMPPNIGQVFKNHMSEMFAYHATMMSNTLGTSTVVFTRSGFMAILLSHYRPAGTIFAFTDQKRVQQRLALYQGVCPIYMEFSDDAEETFTKALDLLQKNGMVKEGEEVALVQSGRQPIWRFHSTHNIQVRTVAATN* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3681 576 SUPERFAMILY PK C-terminal domain-like 422 572 IPR036918 -
Mtr1g3681 576 Pfam Pyruvate kinase, barrel domain 103 439 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr1g3681 576 ProSitePatterns Pyruvate kinase active site signature. 313 325 IPR018209 GO:0004743|GO:0006096
Mtr1g3681 576 PANTHER PYRUVATE KINASE 50 572 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr1g3681 576 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 95 437 IPR015813 GO:0003824
Mtr1g3681 576 PANTHER PLASTIDIAL PYRUVATE KINASE 2 50 572 - -
Mtr1g3681 576 Gene3D - 445 573 IPR036918 -
Mtr1g3681 576 TIGRFAM pyruv_kin: pyruvate kinase 103 572 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr1g3681 576 SUPERFAMILY PK beta-barrel domain-like 172 263 IPR011037 -
Mtr1g3681 576 MobiDBLite consensus disorder prediction 1 53 - -
Mtr1g3681 576 Pfam Pyruvate kinase, alpha/beta domain 460 552 IPR015795 -
Mtr1g3681 576 Gene3D - 105 430 IPR040442 -
Mtr1g3681 576 PRINTS Pyruvate kinase family signature 161 177 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr1g3681 576 PRINTS Pyruvate kinase family signature 285 299 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr1g3681 576 PRINTS Pyruvate kinase family signature 315 341 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr1g3681 576 PRINTS Pyruvate kinase family signature 342 366 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr1g3681 576 PRINTS Pyruvate kinase family signature 367 391 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr1g3681 576 PRINTS Pyruvate kinase family signature 392 410 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr1g3681 576 PRINTS Pyruvate kinase family signature 411 427 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Mtr1g3681 576 Gene3D - 173 266 IPR015806 GO:0004743|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3681 Mtr-Chr1 48495047 48499623 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3681 K00873 - gmx:100818193 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3681 1 48495047 48499623 Mtr1g3681 1 48495047 48499623 ECH
Mtr6g0931 6 12143551 12150361 Mtr1g3681 1 48495047 48499623 PCT