Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3655 ATGTTCCATCATCAAACCAACATCATTATTCTCCTCAGAACCACTTCCTTCTCAAAAAGACACTATTGTCTATGGTCAAGTAAAAAAGACCCATACTTAGAATCAGCACTATCACGCAACAAACGTTGGATAATTAACAACCAAATCAAAAACATTATCCTTCGTTACCCTAACAACCAAATCCCAATCCTAACCCTTCAGAAGAAATTCAAAACCCTAGATCTTCAAGGTAAAGCTCTTAATTGGATTTCCAAATACCCTTCTTGCTTCCAGTTTCATCAAGATCACGTTCTTCTTACTAAACGCATGATGAAGCTTGTTCATGAAGAACAATCCCTTAAAGATTCCCTTGAGTCTGTTTTCGTTCTTCGTCTCGCCAAATTGCTCATGCTTTCTTTGAACAATTGTTTGAATGTTATGAAGATCAATGAAATTAAGAATAGTTTCGGGCTTCCTGATGATTATTTGATTGGGATTGTGGCGAAATATTCCGATTTGTTTCGAATTAGGAATGAGAGTGGGAGGAGAAGTTCTATGGTGGTTGAGTTGATGAAATGGAACCCTGATTTTGCTGTTTCTGAAGTTGAGGCTTTGGCGATGAAGAACGGGGTTGAGGTGAATTTTTCGTGTTGTTTGCCTTCTAGTTGGGTGAAATCGTTGGAGAAATTTCGCGAATTTGAGTTGGTTCCTTATGTTTCGCCTTATTCTGATCCGAGGCGGTTGGTGGAAGGGTCTAAGGAAATGGAGAAGAGGAATTTGGGTTTGGTTCATGAGTTGTTGTCATTGACTCTTTGGAAGAAGATTTCAATTATGAAATTGGGTCATTTTAAAAGGGAGTTTTTTTTGCCTGATAAGGTGAATGTTTTGTTGCTTAAGCATCATGGGATTTTCTATGTTTCTAATAAGTATAGGATTTATACTGTTTTACTTAGAGAAGGGTATGTTGGGTCTCAATTAGTTGATAAAAATCCTCTTGTGGCTGTTAAAGAGAAATTTGGGAAGATTATGCAGGAAGGGCTTCATGAGTATAACCAGAGGCGGCGACTTGTTAATATCGAAAAGAAGAGAAATAAAGGTCTTCCTTTGAATAGGGTGGATGAGGATCACATGAAGGGTAGAAGAAGGAGAAGAAACAGGGAAGTGTCTGATGAAGATGATGAGGTTGAGCGAGAAAATGGTAACAAGCTGGGAGGGTTGCTTGACCCTGAAGAAAGAAAAAGGTTTTATAAAGTTCTTTTTGATGATGATGGTTCATGA 1257 0.3811 MFHHQTNIIILLRTTSFSKRHYCLWSSKKDPYLESALSRNKRWIINNQIKNIILRYPNNQIPILTLQKKFKTLDLQGKALNWISKYPSCFQFHQDHVLLTKRMMKLVHEEQSLKDSLESVFVLRLAKLLMLSLNNCLNVMKINEIKNSFGLPDDYLIGIVAKYSDLFRIRNESGRRSSMVVELMKWNPDFAVSEVEALAMKNGVEVNFSCCLPSSWVKSLEKFREFELVPYVSPYSDPRRLVEGSKEMEKRNLGLVHELLSLTLWKKISIMKLGHFKREFFLPDKVNVLLLKHHGIFYVSNKYRIYTVLLREGYVGSQLVDKNPLVAVKEKFGKIMQEGLHEYNQRRRLVNIEKKRNKGLPLNRVDEDHMKGRRRRRNREVSDEDDEVERENGNKLGGLLDPEERKRFYKVLFDDDGS* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3655 418 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 3 391 - -
Mtr1g3655 418 Pfam Plant organelle RNA recognition domain 28 339 IPR021099 GO:0003723
Mtr1g3655 418 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 3 391 IPR045040 GO:0003723
Mtr1g3655 418 MobiDBLite consensus disorder prediction 361 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3655 Mtr-Chr1 48243479 48245815 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3655 - - mtr:MTR_3g029990 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3655 1 48243479 48245815 Mtr1g3655 1 48243479 48245815 ECH