Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3654 ATGGCGGATCAAGGAGAAGATGAGGATTTGCAAATGGCGATTCGGATGAGTATGACGCCGGAGCCAAAGCGGAATAAACCGAGAGACGAAGTTGCTGGTGTTGTTTCGGGGTTGCCGGAGGATTCACCGGAATCTAAGACGCGGAGACGGGAGCTTATGGCTGCGGCTGCTGAGAAGCGGATGGCAGCGGTTGTTAGGGTTTCTCCTTTGCCTTCACGTTTACCGGCTTCACCGTCGCCGGCAGTTAAAGAAGAGAAGAAGGGTGGGGAAGTTGGAATTGTAAAGAGGGAAGAGGAGTTGGTTTTCAAAGGTGAAAGCTTTAGTAAGGAACTTTCTGCGGAAGAAGCTAATAAATTGTTTGTTATGGTGTTTGGAAGTGAAGTTTCGAAGGGCATTCTAGCACAATGGTGTAACCAAGGAATAAGGTTTAGCTCTGATCCTGAAACATCAATGGGCCTAGTGCAGCATGAAGGAGGCCCCTGTGGCGTTTTGGCAACTATACAGGCATTCGTGCTCAAATATATTATTTTCTTCAGCGATGAATTGAAAGAATTGTCACGCATGCCACAGAATCGAGGTCTGGGTGTGTCAAGTAAAAGTCACCCAGCTCCATCATATAATATTTCGTCACTCACTGATGGTGTAAAAGTAAGAGCCCTGGTAAGAAGTATGGGTGAAATTTTATTTTCATGTGGAAATAATAAAAGGGCTGTGATTGCAACTTTGAGCATTCCAGGGAATGATAGTCAACGTTTTGAAGGAATCTCAGAGGAGGAGCAGGTTATTGCAAGCTCACTTAAAGCTCTTTCTATTGATTCTGCCTTGGATTTGCTGAAAGTTCTTAGAGTTGAAACACACACATCAGAAACAACTGCTTTACAGAGGCTTGAAGCAAATATTCCTTTATTCCAAAGTCGTATGGGGGCATTGCTTTTCCTAATCTCTGCTTTACTTTCTCGCGGACTGGATTTGGTTCAAAGTGACAGGGATGATCCCAGCCTACCATTGGTTACTGCTCCTTTTGGGCATGCCTCCCAGGAAATTGTAAACCTGCTACTCTGTGGGCAGGCTGTCCCTAATGTATTTGATGGAAGGATGGATTTGGGTGGGGGAATGTTTCTAAAAGGTATATCCCGAACTGTGGAAGTTGGATTTCTCACCCTGCTTGAGTCCCTGAATTTCTGCAAGGTTGGTCAGTTTCTGAAAACCCCAAAATGGCCTATATGGGTTGTTGGGAGTGAATCCCATTACACAGTGTTGTTTGCTCTTGATCCCACCGTTCAAAATGAGAATGAACTGGAAGGAAGGGAGACACAGATTCGCAAAGCTTTTGATGCCCAAGATCAAAGTGGAGGTGGCGGCTTCATTAGTGTTGAGGGGTTCCATCAAGTCATCAGAGAAACAAATATCAAACTTCCGGCAGATAAGCTAGATAACCTTTGCAGTGCAGGGTTCATTGTATGGAGTGAATTCTGGCAGGTAATTTTGGACCTGGACAAAAGCTTGGGAGGTTTGAAAGATTCATCAGGATTGATGGGTAAGAAGGTCTTTGACCTTTTCCATTTTAATGGGATTGCTAAATCAGATTTGAATGGCAGTCAAGTAAGTTTTGGGGGTGAAACTCCACTGCAAAGACCCAGGCTCACAAAATTAAGCGTCTCAGTTCCCCCAAGGTGGACACCTGAGGAATTTATGACAAATGTGCAAGGTCCATCTGCTTCCGGTGCAAGTGACTCTGCTGGGAAGGACACAGAAGTATCTAAACCAGAGCCTACTCAGCATGCGCCTTTGGTTGACTGCATAAGAACACGCTGGGCCCGTGCTGTCTGCAGCTGGTCAGGTGATCCTCCTAGTATAGTCTGA 1863 0.4541 MADQGEDEDLQMAIRMSMTPEPKRNKPRDEVAGVVSGLPEDSPESKTRRRELMAAAAEKRMAAVVRVSPLPSRLPASPSPAVKEEKKGGEVGIVKREEELVFKGESFSKELSAEEANKLFVMVFGSEVSKGILAQWCNQGIRFSSDPETSMGLVQHEGGPCGVLATIQAFVLKYIIFFSDELKELSRMPQNRGLGVSSKSHPAPSYNISSLTDGVKVRALVRSMGEILFSCGNNKRAVIATLSIPGNDSQRFEGISEEEQVIASSLKALSIDSALDLLKVLRVETHTSETTALQRLEANIPLFQSRMGALLFLISALLSRGLDLVQSDRDDPSLPLVTAPFGHASQEIVNLLLCGQAVPNVFDGRMDLGGGMFLKGISRTVEVGFLTLLESLNFCKVGQFLKTPKWPIWVVGSESHYTVLFALDPTVQNENELEGRETQIRKAFDAQDQSGGGGFISVEGFHQVIRETNIKLPADKLDNLCSAGFIVWSEFWQVILDLDKSLGGLKDSSGLMGKKVFDLFHFNGIAKSDLNGSQVSFGGETPLQRPRLTKLSVSVPPRWTPEEFMTNVQGPSASGASDSAGKDTEVSKPEPTQHAPLVDCIRTRWARAVCSWSGDPPSIV* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3654 620 MobiDBLite consensus disorder prediction 565 581 - -
Mtr1g3654 620 SUPERFAMILY EF-hand 436 496 IPR011992 -
Mtr1g3654 620 SMART DUF4205_3 120 490 IPR025257 -
Mtr1g3654 620 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 5 24 IPR003903 -
Mtr1g3654 620 Pfam Deubiquitinating enzyme MINDY-3/4, conserved domain 122 433 IPR025257 -
Mtr1g3654 620 MobiDBLite consensus disorder prediction 1 49 - -
Mtr1g3654 620 PANTHER UNCHARACTERIZED 3 619 IPR039785 GO:0004843|GO:0071108|GO:1990380
Mtr1g3654 620 MobiDBLite consensus disorder prediction 562 595 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3654 K22647 - gmx:100813222 974.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3654 1 48231444 48238875 Mtr1g3654 1 48231444 48238875 ECH