Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3649 ATGCCCGCTACGGACTATCAAGGTTCGTCTCCTTCATCGTTAACAAATTTTGGCCGTTCAATTCTAAGCTTTCGTCGTGAACAGATTCATTCAATGGAAGGTTCAACCTTGGAGATTGAGCTTGATTCATTTCAACAACATGTTACTGATCGTTTTGTTGATCTTTCATCTGTTCCTCATGATGAATTGCTTTCACTCAAATGGGTTGGGAAGATGCTTGATTGCTTCCTCATTTGTCAAGAGGAGTTTAAAGCCATTCTTCATACTCACAAAGGCCAGGTTGTGAGACCACCTTTGGATCGAATGGTTTCGGAGTATTTTGAAAGGAGTGTGAAGGCTTTGGATGTCTGTAACGCCATTCGTGACGGCGTTGAACAGATTCGTGTTTGGCAGAAACTGTTGGAGATTGTTCTTTATGCATTGGATCATCAGAGGAGTATTGGTGAAGGACAATTTCGTAGAGCGAAGAAAGCTCTAATTGATTTGTCAATCAGTATGCTTGATGATGGTAAGGAATCCAATGCTTCTGTTGCACACAGGAATCGATCTTTTGGCCGCAGCAATGGTGGTAGAGATAGAGATCACCATCAACATGGCAACAGTCATAGCAATAACAATATTAACACCTATCAGCATCGGTCTATGGGGCAATTTAGATCACTTTCGTGGAGTGTTTCTCGTACTTGGTCTGCTGCTAGACAGCTCCAAGCAATTGGGAACAACATTAATCCTCCAAGAGCAAATGATCTTATGGCAACTAATGGTCTTGCAATGTCGGTGTATACCATGAATTCGGTATTGTTGTTTGTTATGTGGGCTCTTGTGGCTGCAATTCCATGCCAAGACCGTGGATTGAATGTGCATTTCAGCATTCCAAGGAGTTACACTTGGGCTATTCCTTTGCTCTTACTTCATGAGAGGATCATGGAGGAGTCCAAGAAGCGTGACAGGAAGAATGCTTGTGGCTTGCTTAGAGAGATTCAACAGATTGAGAAATGTGTCAGGGTGATGAGTGATTTGGTTGATTCAGCGCACTTTCCATTAACCGAGGAGAAGGAAGGTGAAGTTAGACAGAAAGTTCATGAGGTTTCAAAAGTTTGTGATGCTTTGAAGGATGGGCTTGATCCTTTGGAGCGACAAGTAAGGGAAGTTTTTCATAGAATTGTGCGCAGCAAAACAGAAGGGCTTGATTCTCTTGGTAGGCCAAACAATGAGTAA 1218 0.4253 MPATDYQGSSPSSLTNFGRSILSFRREQIHSMEGSTLEIELDSFQQHVTDRFVDLSSVPHDELLSLKWVGKMLDCFLICQEEFKAILHTHKGQVVRPPLDRMVSEYFERSVKALDVCNAIRDGVEQIRVWQKLLEIVLYALDHQRSIGEGQFRRAKKALIDLSISMLDDGKESNASVAHRNRSFGRSNGGRDRDHHQHGNSHSNNNINTYQHRSMGQFRSLSWSVSRTWSAARQLQAIGNNINPPRANDLMATNGLAMSVYTMNSVLLFVMWALVAAIPCQDRGLNVHFSIPRSYTWAIPLLLLHERIMEESKKRDRKNACGLLREIQQIEKCVRVMSDLVDSAHFPLTEEKEGEVRQKVHEVSKVCDALKDGLDPLERQVREVFHRIVRSKTEGLDSLGRPNNE* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3649 405 MobiDBLite consensus disorder prediction 173 209 - -
Mtr1g3649 405 MobiDBLite consensus disorder prediction 185 200 - -
Mtr1g3649 405 Pfam Protein ROH1-like 15 399 IPR008511 -
Mtr1g3649 405 PANTHER OS04G0688000 PROTEIN 1 404 - -
Mtr1g3649 405 PANTHER BPS1-LIKE PROTEIN 1 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3649 Mtr-Chr1 48102734 48104584 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3649 - - gmx:100818059 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3649 1 48102734 48104584 Mtr1g3649 1 48102734 48104584 ECH
Mtr6g0998 6 13419702 13421140 Mtr1g3649 1 48102734 48104584 PCT