Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3648 ATGGAGGTTGAATTAGGTCTAAAGATAACAAGAACAAAAGATGACACCACTTCCATTTCTGATTTTCAGTTTGCCAAAGACAGAGCAGGACCTATCTTCTTATCTAAAGAAACTGATGCAACTTTCACCCTCACAGCACATCTCAAAGGTTATAAGAAAGAGAACATTGACATCAACATTAACAAAGATGGTACAAAAATTTCAGTTAGTGGTGAAAAAGAGGTGCAAGAAATGCAGATGATACCATTCAAGAAAGAGCTGAAAATAAAAGGATTTAGAAAGAAGTTTAAAATCCCTAATGGAGTTGTTTTGGATAAGATCAAAGCTAAGTATTACGAAGAGGAAGAAGTGTTGAGAATAGTGATGCCAAAAACGGAAATAGTAAAAGGAGTACTGAGTGGGATGGGAATAGAAGAAGTGAAGGAAGAAGAGGGTGCAAGTAGCATTATAGAAGAACCAGAACAAAGTTCAAGAGAAGAAGTAAAGGTTACAGATCATAAGAGTGAAGAGGAAAATGCTCCTGTTAAGAAGAGACGTCCTAGAAAACCATGGCAACCTTGTCCACCTTTGATTCTTGGAGGATCAACTTTGCTTGTCTCTATTATCTTTCTTGTAATGCACTATATTAGAGTGAGAAAGAGTTGA 645 0.3643 MEVELGLKITRTKDDTTSISDFQFAKDRAGPIFLSKETDATFTLTAHLKGYKKENIDININKDGTKISVSGEKEVQEMQMIPFKKELKIKGFRKKFKIPNGVVLDKIKAKYYEEEEVLRIVMPKTEIVKGVLSGMGIEEVKEEEGASSIIEEPEQSSREEVKVTDHKSEEENAPVKKRRPRKPWQPCPPLILGGSTLLVSIIFLVMHYIRVRKS* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3648 214 MobiDBLite consensus disorder prediction 143 178 - -
Mtr1g3648 214 PANTHER HEAT SHOCK PROTEIN 26 142 212 IPR045045 -
Mtr1g3648 214 PANTHER HEAT SHOCK PROTEIN 26 1 172 IPR045045 -
Mtr1g3648 214 MobiDBLite consensus disorder prediction 143 182 - -
Mtr1g3648 214 Pfam Hsp20/alpha crystallin family 36 127 IPR002068 -
Mtr1g3648 214 PANTHER HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN 142 212 - -
Mtr1g3648 214 PANTHER HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN 1 172 - -
Mtr1g3648 214 SUPERFAMILY HSP20-like chaperones 36 129 IPR008978 -
Mtr1g3648 214 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 23 143 IPR002068 -
Mtr1g3648 214 CDD ACD_sHsps-like 36 124 - -
Mtr1g3648 214 Gene3D - 9 131 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3648 Mtr-Chr1 48096332 48097536 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3648 - - aprc:113873754 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3648 1 48096332 48097536 Mtr1g3648 1 48096332 48097536 ECH
Mtr6g1003 6 13503311 13511021 Mtr1g3648 1 48096332 48097536 PCT