Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3623 ATGTCTGTAACATCTTCAATCCCATGCATCAAAATCCCAACAACTCATTCATCTTCCTCTTCTTGTTCAACTTCATCTTATTCTTTTAGATTCTCTTCTTCCAAGCTTTATGCTGTTACTATAAGGAATGTTCAGAATGATGGTCCTTTGAGAAGACCAGCGGCTCCTTCTGTGAAAGAACCGTCTAATCTTCCTCAACCTTTGAAACCTTCACCTCCTTCTCAGCCTCCACCACCACAACCTCAGAAGACAAGTTCTTTTGTTGGTGATGATAAAAGTGTTGTTTCGTTAGAGTTTCAGAGACAAAAGGCTAAGGAATTGCAGGAATATTTCAAAAAGAAGAAGCTTGAACAAGCTGCAGATCAAGGTCCCTTTTTTGGATTCATTGCCAAAAATGAGATTAGCAATGGAAGATGGGCAATGTTTGGTTTTGCTGTTGGGTTGCTAACCGAGTTTGCAACAGGCTCAGACTTTGTTGATCAAGTGAAGATCCTTCTCTCGAATTTTGGAATAGTAGATTTGGATTGA 528 0.3958 MSVTSSIPCIKIPTTHSSSSSCSTSSYSFRFSSSKLYAVTIRNVQNDGPLRRPAAPSVKEPSNLPQPLKPSPPSQPPPPQPQKTSSFVGDDKSVVSLEFQRQKAKELQEYFKKKKLEQAADQGPFFGFIAKNEISNGRWAMFGFAVGLLTEFATGSDFVDQVKILLSNFGIVDLD* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3623 175 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 1 174 - -
Mtr1g3623 175 PANTHER MYB-LIKE PROTEIN U 1 174 - -
Mtr1g3623 175 MobiDBLite consensus disorder prediction 47 89 - -
Mtr1g3623 175 Gene3D Chlorophyll a/b binding protein domain 83 168 - -
Mtr1g3623 175 SUPERFAMILY Chlorophyll a-b binding protein 121 164 - -
Mtr1g3623 175 MobiDBLite consensus disorder prediction 63 83 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3623 - - gmx:100527001 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3623 1 47879336 47881536 Mtr1g3623 1 47879336 47881536 ECH