Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3622 ATGTTATTTGCAGTAGAAGGTGGAGGATTCTTCTCTGCTTCGGCTTCAGGGTATAGCAAGGGCCTGAGCCTACTCCTTTTGGGTCAGAGGAATGAGGATAAACCCATGAGAGTTGCACCGTGGAACCATTACCAGTTGGTAGTCCAAGAATCTGACCCTCAACTCCAGCTGGCTCCCACAAAGAATCGCCTTTCCCGCGGGTGTGCCTCCTTTGTTTGCTTTGGTCGCACTTCCGCAGGGCCTGATACTCCATCACCTCTTAAAGTGGGACCAACCCAACAGCATGATGTTTCACCAAGGCTACCAGTTTCTAACGATGGAAAGGATCCCTCTCATATAGATGATAACAATGATGGTATAAAGGTCACTCTTAAAAGTAGCATTAGAAGGCCACACAGTAATAAATCAGTTTCTGTTGAGGCTACTAACGAGCAAGAAGCATCAGGTGGACATGTGGTTTTTACTCCTGGTGATCAAGCAGAAAGAAGGAGAGTGCAGTGGACAGATGCTTGCGGTAGCGAGCTTGTTGAAATACGAGAATTTGAGCCCAGTAAGGAGTGGCGCTTCGGTTGCCATATGCCTCTCCTCAAGCTTTTGGGTGTCTGTGATTGGAGTGAAGTGGATGGATCAGATGATGAATATGATAATGGAAATGAGAGAACATGTTCCTGTGCGATAATGTAA 684 0.4664 MLFAVEGGGFFSASASGYSKGLSLLLLGQRNEDKPMRVAPWNHYQLVVQESDPQLQLAPTKNRLSRGCASFVCFGRTSAGPDTPSPLKVGPTQQHDVSPRLPVSNDGKDPSHIDDNNDGIKVTLKSSIRRPHSNKSVSVEATNEQEASGGHVVFTPGDQAERRRVQWTDACGSELVEIREFEPSKEWRFGCHMPLLKLLGVCDWSEVDGSDDEYDNGNERTCSCAIM* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3622 227 PANTHER LIGHT-HARVESTING COMPLEX-LIKE PROTEIN OHP2, CHLOROPLASTIC 1 227 - -
Mtr1g3622 227 PANTHER LOW AFFINITY POTASSIUM TRANSPORT SYSTEM PROTEIN 1 227 - -
Mtr1g3622 227 MobiDBLite consensus disorder prediction 80 150 - -
Mtr1g3622 227 MobiDBLite consensus disorder prediction 120 149 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3622 - - mtr:MTR_1g098260 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3622 1 47868774 47874574 Mtr1g3622 1 47868774 47874574 ECH