Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3620 ATGGCTCCTTCAAGCAAGGCTGAGAAGAAGGCAGCTGTAGATGCTGCGGCATGGATGTTCAATGTTGTCACATCAGTTGGAATTATCATTGTAAACAAAGCTTTGATGGGTGGTTATGGCTTCAGTTTTGCTACAACGTTAACGGGTCTTCATTTTGTTACTACAACTATTATGACGCTCGTACTACGGGTGCTGGGATACGTCCAGCCATCTCATCTTCCATTGTCCGAACTTCTAAAATTTGTTTTCTTTGCTAACTTCTCTATTGTCGGAATGAATGTCAGTTTAATGTGGAACTCAGTTGGATTCTATCAAATTGCCAAGTTGAGTATGATCCCTGTATCCTGCTTGTTGGAAGTTTGTTTGGACAAGATTCGCTATTCAAGAGACACAAAACTGAGCATAGGTATTGTTCTTTTGGGAGTTGGTGTTTGCACTGTTACTGACGTGAGTGTAAACATGAAAGGTTTTGTTGCTGCCTTTATAGCAGTTTGGAGCACATCTCTGCAGCAATATTATGTTCATTATCTTCAACGGAAGTATTCACTAAGTTCTTTCAACCTTTTGGGACATACAGCACCCGCACAGGCTGGATCACTATTGTTATTGGGCCCTCTTCTAGACTATTGGTTGACAAACAAAAGAGTTGATCAATATTCTTACGATGCAGCCTCTTCGATGTTCTTAATCCTGTCATGCACCATTGCAGTTGGGACCAATCTCAGCCAATTTATCTGCATTGGCAGATTTACAGCTGTATCTTTCCAAGTACTTGGACATATGAAGACAATACTTGTTTTAATAATGGGATTCTTTTTCTTTGGGAGGGAAGGTCTTAATCTTCATGTAGTTATAGGGATGATAATAGCTGTTGTTGGAATGATGTGGTATGGTAATGCCTCATCAAAGCCTGGTGGAAAGGAACGTTGGAGTCTCCCTACCAGCAAAACAGAAAGTCGGTGA 963 0.4081 MAPSSKAEKKAAVDAAAWMFNVVTSVGIIIVNKALMGGYGFSFATTLTGLHFVTTTIMTLVLRVLGYVQPSHLPLSELLKFVFFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEVCLDKIRYSRDTKLSIGIVLLGVGVCTVTDVSVNMKGFVAAFIAVWSTSLQQYYVHYLQRKYSLSSFNLLGHTAPAQAGSLLLLGPLLDYWLTNKRVDQYSYDAASSMFLILSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLIMGFFFFGREGLNLHVVIGMIIAVVGMMWYGNASSKPGGKERWSLPTSKTESR* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3620 320 PANTHER SOLUTE CARRIER FAMILY 35 7 310 - -
Mtr1g3620 320 PANTHER - 7 310 - -
Mtr1g3620 320 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3620 Mtr-Chr1 47854922 47859285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3620 18 318 Organic Solute Cotransporters AT1G77610 26.708 2.42e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3620 - - vvi:100854983 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3620 1 47854922 47859285 Mtr1g3620 1 47854922 47859285 ECH
Mtr6g1169 6 16248928 16252017 Mtr1g3620 1 47854922 47859285 PCT