Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3571 ATGTGTAGCATGTGCCATTATTGCGGTGCAAGCTTGACGGAATCAAATGCTGACAATAAGAAGCAGGGAAATGAGAATAGTTTAAAGTTGAATGGGAAAGTTCCCGTAAAACCTTGTAAAGCATGTGGAGAGAAGCTTGAGCGAGAAAATGTGAAACGGAATAGCACAAGTCCATATGCGACACCGCATATCAGTCCATCTGCATCGCTGTCAAGTACTGACAGCTGTGTGTCCACCTGCAGTGAATTTTCAGTTGATGTGAACTCATTTGACAGGAATAGTCGAGAAGAAAAGTTAATCGAAGGTGCTATGCAAGATCTTGATTATAAGTCAAACGCGAAATCACAAAATCCGATGGAAAACAACAGCCAAGAAAGAAGTAATGAGTTTGAGGGCTATACTGTGAGAGACGTGGATATTACAGAAGGAAATAGCTTTCAAGAAGCTAAAGCGGATGGTTCCGACGAGCCAACTGCATCCTCCGCTGAAGAAAACGAATACTCTTTTCCCGATGATCTGGATATCCAAACTTGGGAACCACCCGAGCCAGAAGATCCGCTGGATGATATGGAAAATAGCGTGGCTTGTAATGACGATGATGAAGAACATGGCATCGGGATTGCAAACTGGGGCGAGCCAACCTCCACGAGTAGTTCCAAGGATGAATTAAGTGGGGGCTATAGGTTTAGAGAGGAAAGACAAAGAGAATTAGAAAAAGTAATGAATGGGAAATTTAAGGCCCTTGTAGGTCAGCTTCTTAAATCTGTGGGAGTTTCCTCTTCCGATGAAGGCGATAAGAGTTGGGTGGACATAGTTACATATTTATCTTGGGAAGCTGCTGCATTTTTGAAGCCTAATGCTATTGGAGGAAATGCAATGAATCCTGATGGATTTGTTAAAGTGAAGTGCATTGCAGCTGGTTCTCGCAGCCAAAGTCAACTATTCAAAGGTTTGGTCTTCAAGAAACACGCCTCTCACAAGCATATGCCAACTAAGTACAAAAATCCAAGGTTGCTACTGATTAGGGGTATGCTTGGCCAATCTATGAATGGGCTGTCCTCATTTGAATCCATGGACCAGGAGAAAGACTATCTGAAATCTAAAATGGATCTTATAAAAATATGTCATCCAAATGTTATATTAGTGGAGAAAACTGTTTCTCGTGATATCCAAGAGGCAATTCTGGATAATGGGATGACGCTAGTACTTGATATGAAGCTTCATCGACTGGAAAGAGTTGCACGCTGCACTGGTTCACCAATTCTTTCATGTGATGATTTGAACGGCCAAACACTAAGACAGTGTGACTCTATTTACTTTGAGAAGTTTGTGGAGGAACATGATGGTACTGGCGAAGGAGGAAAGAGGCCCACCAAGACCTTGATGTTCATTGAAGGGTGTCCTACACGCTTGGGTTGTACGATTTTGCTGAAAGGAACACACAGTGATGAACTGAAGAGAATCAAATGTGTCATGCGGTGTGCAGTTATCATGGCATATAACTTAATCCTCGAAACCTGTTTTCTAGTTGATCAGAAAGCAATGTTCTCTACCATTCCTCCAGCTAATGTGGCAGATATCTTGCCAATCCATCAAGAATCCAGCGGCTCAGCATCTATAAATTCATGTGTTCCGTCGTCTCTTGAGCATTCTGATGAAAATGGAATAGTTAGTACTGATATTCCCATATGCAATGGACTTCATGAAAATAGCACCAATGGTTTAACCGTAGAATCTGAAGAGTTTTCCCCATTTTCTCATGAAGCATATAATCCAGCTGTATTTTCTGGATTCTCAGCAATTTCATCTTCTCTGAAGAAGGTTGTGGGGGATAGTTTTCCCTTTGCAAATTCTGCTCCTTACCAGTCTCTATCAGCATACTTTGGCTTCAATGGAAGGAAACCAGATGGTCAGGTCAACAATTCTGTTTCTATTGTGGAATCTCCGGAAGCAGATGAAGATACCAAGATTGAAGCAAAAAATTATTCCGATGAAGTAAAGTTACTTTATGACGGACAAACCCTGTCTTCACCTGTGCGCTTAGATTCCAAGGGCGGTATAAGTAAAGTTGATAATGAAAAAAAAGAACTCCAGAGTAAAGATGATATCAATGCAGTGTTGGATTCTCAGAGTATTTTGGTCTTGATGTCTAGCCGTAATGCCTTAACAGGCACTGTATGCAAGCAAAGTCATTTTTCACATATTATGTTCTACAAGAATTTCGACATCCAACTTGGAAAGTTTCTGCAGGATAGCCTACTCAATCAGACAAGACTTTGTGACACCTGCCAAGAATTGCCAGAAGCTCACCTTTATTATTATGCTCATCACAATAAACAGCTTACTATACAAGTGAAGCGATTGCCGCCAGGAATTGTTTTAGCTGGCAAGGAAGAAGGAAAAATTTGGATGTGGAGCCGATGTGGAAAATGCAAGTCTTGTTCTACAAAAAGAGTGTTGATATCCACCACTGCCCGCTGTCTATCATTTGGAAATTTTTTGGAGCTTAGTCTTTCTCACTATTCATCTAGCAGAAAATTGGGCTGTGGCCATTCTCTTGATAGGGATTTTCTCTACTTCTTTGGATTAGGTCACATGGTTGCAGTGTTCAGATATTCTTCAGTCACTACTTATACTGTGTCTATGCCTCCTCAAAAGCTCGAGTTTGATGGTGCGATAAAACAAGAGTGGCTTTTGAAAGAGACCGAAACTGTGCACTTGAAAGGCATATCACTATTCACAGAAATTGCAAACTGTTTGAAGACAATACAATCTGATGGATCAATCTCTAACCAAGGATCAATAAGAGAGTTCTCTGAGGTTGAGAAGATGTTAAAACAAGAGCGAGAAGAGTTTGAGGTTAACATCAAGATTGCTGTTGCTATGAAAGGTGATCCAGATCGGGCTGCTTTCAAACTTCTCAGTCTCAACCGATTGATGTGGGATCTTCTGATTGAATCTGCAGTGTGGAATCAACGCTTGAAATCATTACGCTCACCTGAGAAAGCTATGCAAGAGTATAGTTATTCAAAGGTGGAAGGTACTGCTGGTAGAGAATCTGCATCTATGGGTAATTTTAGGGAGGATGATTCTGTGATTGGGGATTCCCATGCGAAAATTGTGCCGAACACTTCTGTGGAACTAAATGAAATCACAATAACGGACATTCCTATCAGTGGATCTCCTCGAGAGTGCAATAAGCAGGATGATTATGATCCATCTATCACTTTTGATATCCCTCAGAATTTGAAAATACAAACTGTTGATGGTTTAGGATCGAAGAGATATTCTGACCAAAAATTGGAATCGAGTTCAGATGTTTTCACTCAGTTTCCTTCGGCAAATGGTCATCTTCAAGTACATGGAAACTTTCCAGTTTCTGTCGATGTTCAACCTAGTCGTTCAACCGCTGATTTAAAGGTATTAAACAAGATTGCTTCACTGCATTCACCTGTTTCCAACTTGCTCAACTCTACTGAATGGTTCTGGAAGCCATTTGCTGATATTCGGCAGACAAGCATACGGGAGTTTCAGAAAAGTTTCTTTCCAAAATTTGAATCCTTTTGCAGTTCTATTACAGAACATGTGCCCACAGCCGATCAATTGATCATTGAGGAAGGTCCAAGGTTGCACATTCCTCTCAAGACAGATAGTCATATTGTGTCTGACTTTGAGGGTGAACTCTCGAGCATAATTGCTTGTGCTCTGGCCTTGTTGAAAGATTCATCTGAGGTGACAGAAATTGATGAGGGTGGAATAACTTCAAAGTCGACGGATTTTTCGCATGGCTCTCAAGATTCAGATTCTTCGCATTCTCCAGGAAGCACGTCTTCAGAAGAATCACGGGCATTTCGTACTCCGGAAAACCATAGCATAGAAGTTCATTTGGGTTATGCAAAATCACTTGGTAGAGAAAAATATTCTGTGGTTTGTCATCATTTTAAGCAGTTCCATGCACTTAGAAATTGCTGTTGCCCATCTGAGATTGATTATATCGCTTCTTTAAGCCGTTGTATGAATTGGGATGCCAAAGGTGGAAAAAGCAAGTCGTTTTTTGCAAAAACACTTGATGACAGGTTCATCATAAAGGAAATCAAGAAGACAGAACTTGAAGCATTTTTGGGGTTCTCTTCTCTCTATTTCAAGCACATGAGAGACTCATTTGAGTTTGGGAGCCAGACATGTCTTGCAAAAATCTTGGGGATATATCAGGTTACAAAAAGACACATTAAAAGTGGAAAAGAGGTTAAACATGACCTCGTGGTGATGGAAAATCTTTCCTACAATCGAAATATTGTACGCCAGTATGATCTTAAAGGTGCCCTTTTTGACCGGTATACTTCTGCTGCTGTTGGTGCTGGAGATGTTCTTTTGGATCAGAACTTTGTGAATGATATGAACTCTTCCCCATTATATGTCAGTCATAAAGCAAAGCGAGTTCTTCAGCGGGCTGTTTGGAATGACACATCTTTTCTCAATTCGATCAATGTGATGGATTATTCCTTACTTGTTGGAGTTGATTCTCAGAAGCGCGAACTTGTTTGCGGGATCATTGATTATCTCAGACAGTATACCTGGGACAAGCATCTTGAGACATGGATGAAGTCTTCACTTGTTGTGCCCAAGAATCTACTGCCGACTGTGATCTCTCCAAAAGAATACAAGAAGAGGTTCAGAAAGTTTATGTCTACATATTTTTTGAGTGTTCCGGATGATTGGTGTTCTCAGAAGTCCCCTATTCCTTGCAAACTTTGTTGCTCAGGAGATGACCTTTCCCTACAAAAATCCTTGCACTAG 4797 0.4082 MCSMCHYCGASLTESNADNKKQGNENSLKLNGKVPVKPCKACGEKLERENVKRNSTSPYATPHISPSASLSSTDSCVSTCSEFSVDVNSFDRNSREEKLIEGAMQDLDYKSNAKSQNPMENNSQERSNEFEGYTVRDVDITEGNSFQEAKADGSDEPTASSAEENEYSFPDDLDIQTWEPPEPEDPLDDMENSVACNDDDEEHGIGIANWGEPTSTSSSKDELSGGYRFREERQRELEKVMNGKFKALVGQLLKSVGVSSSDEGDKSWVDIVTYLSWEAAAFLKPNAIGGNAMNPDGFVKVKCIAAGSRSQSQLFKGLVFKKHASHKHMPTKYKNPRLLLIRGMLGQSMNGLSSFESMDQEKDYLKSKMDLIKICHPNVILVEKTVSRDIQEAILDNGMTLVLDMKLHRLERVARCTGSPILSCDDLNGQTLRQCDSIYFEKFVEEHDGTGEGGKRPTKTLMFIEGCPTRLGCTILLKGTHSDELKRIKCVMRCAVIMAYNLILETCFLVDQKAMFSTIPPANVADILPIHQESSGSASINSCVPSSLEHSDENGIVSTDIPICNGLHENSTNGLTVESEEFSPFSHEAYNPAVFSGFSAISSSLKKVVGDSFPFANSAPYQSLSAYFGFNGRKPDGQVNNSVSIVESPEADEDTKIEAKNYSDEVKLLYDGQTLSSPVRLDSKGGISKVDNEKKELQSKDDINAVLDSQSILVLMSSRNALTGTVCKQSHFSHIMFYKNFDIQLGKFLQDSLLNQTRLCDTCQELPEAHLYYYAHHNKQLTIQVKRLPPGIVLAGKEEGKIWMWSRCGKCKSCSTKRVLISTTARCLSFGNFLELSLSHYSSSRKLGCGHSLDRDFLYFFGLGHMVAVFRYSSVTTYTVSMPPQKLEFDGAIKQEWLLKETETVHLKGISLFTEIANCLKTIQSDGSISNQGSIREFSEVEKMLKQEREEFEVNIKIAVAMKGDPDRAAFKLLSLNRLMWDLLIESAVWNQRLKSLRSPEKAMQEYSYSKVEGTAGRESASMGNFREDDSVIGDSHAKIVPNTSVELNEITITDIPISGSPRECNKQDDYDPSITFDIPQNLKIQTVDGLGSKRYSDQKLESSSDVFTQFPSANGHLQVHGNFPVSVDVQPSRSTADLKVLNKIASLHSPVSNLLNSTEWFWKPFADIRQTSIREFQKSFFPKFESFCSSITEHVPTADQLIIEEGPRLHIPLKTDSHIVSDFEGELSSIIACALALLKDSSEVTEIDEGGITSKSTDFSHGSQDSDSSHSPGSTSSEESRAFRTPENHSIEVHLGYAKSLGREKYSVVCHHFKQFHALRNCCCPSEIDYIASLSRCMNWDAKGGKSKSFFAKTLDDRFIIKEIKKTELEAFLGFSSLYFKHMRDSFEFGSQTCLAKILGIYQVTKRHIKSGKEVKHDLVVMENLSYNRNIVRQYDLKGALFDRYTSAAVGAGDVLLDQNFVNDMNSSPLYVSHKAKRVLQRAVWNDTSFLNSINVMDYSLLVGVDSQKRELVCGIIDYLRQYTWDKHLETWMKSSLVVPKNLLPTVISPKEYKKRFRKFMSTYFLSVPDDWCSQKSPIPCKLCCSGDDLSLQKSLH* 1599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3571 1598 CDD Fab1_TCP 246 512 - -
Mtr1g3571 1598 Pfam TCP-1/cpn60 chaperonin family 251 506 IPR002423 GO:0005524
Mtr1g3571 1598 Gene3D GroEL 310 479 IPR027409 -
Mtr1g3571 1598 MobiDBLite consensus disorder prediction 177 196 - -
Mtr1g3571 1598 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1254 1425 IPR027484 -
Mtr1g3571 1598 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1248 1566 IPR002498 GO:0016307|GO:0046488
Mtr1g3571 1598 MobiDBLite consensus disorder prediction 145 226 - -
Mtr1g3571 1598 MobiDBLite consensus disorder prediction 1253 1286 - -
Mtr1g3571 1598 MobiDBLite consensus disorder prediction 50 73 - -
Mtr1g3571 1598 CDD PIPKc_PIKfyve 1306 1566 IPR044769 GO:0000285
Mtr1g3571 1598 SUPERFAMILY SAICAR synthase-like 1304 1566 - -
Mtr1g3571 1598 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED 166 1590 - -
Mtr1g3571 1598 SUPERFAMILY GroEL apical domain-like 311 479 IPR027409 -
Mtr1g3571 1598 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 166 1590 - -
Mtr1g3571 1598 SMART PIPK_2 1278 1567 IPR002498 GO:0016307|GO:0046488
Mtr1g3571 1598 MobiDBLite consensus disorder prediction 109 129 - -
Mtr1g3571 1598 MobiDBLite consensus disorder prediction 1253 1282 - -
Mtr1g3571 1598 MobiDBLite consensus disorder prediction 53 73 - -
Mtr1g3571 1598 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1344 1510 IPR002498 GO:0016307|GO:0046488
Mtr1g3571 1598 Gene3D - 1426 1567 - -
Mtr1g3571 1598 MobiDBLite consensus disorder prediction 102 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3571 Mtr-Chr1 47424778 47436249 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3571 329 1576 Acyl Lipid Metabolism Gene Families AT1G34260 48.137 0.0 1078
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3571 K00921 - gmx:100809696 2413.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3571 1 47424778 47436249 Mtr1g3571 1 47424778 47436249 ECH