Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3569 ATGCCTCCAATTCCAAAGAACAACAACAATACCTCATTCTCCATTCCCACACTCTTTCTTTTCTTCATCATCATCTCCATTCTCTCTCTCACATTCTTCTTCTTCTCCTCCTACACCACCACCACACACTCTTCACTCTCTCTCCAACCCACCACCTCCTGCATCAACGTCTACGTCGCCGACCTCCCCAGATCCCTCAACTACGCCCTCCTCAACCGATACTGGTCCTTCACCTCCGATTCCCGTATCGGCAGCGACGTCGATAGTGAAATTCGATCCAAAAGCAAAGCCTTAGAATTTACTGAATTTCCACCATACCCAGAGAACCCAATTATCAAACAGTACAGTGCGGAGTATTGGATCATGGGGGATCTTGTTACACCCTCGAAATTGCGAACTGGGTCGTTTGCAAAACGGGTTTTTGATGAACGTGAGGCTGATGTGGTTTTTGTTCCGTTTTTTGCTACTATTAGTGCTGAATTGCAATTGGGTATGGCGAAAGGGGTTTTCAGGAAGAAAGTTGGGAATGAGGATTATCAGAGGCAGAGTGAGGTTGTTGATTTTGTGAAGAAAACTGAAGCTTGGAATCGTTCTGGTGGAAGAGATCATGTGTTTGTTGTCACTGACCCAGTTGCAATGTGGCATGTTAAAGATGAGATTGCCCCGGCTATTCTCCTTGTTGTGGATTTTGGTGGGTGGTATAGACTTGACTCAAAATTATCCAATTGTACCTCGTCTGAAATGATCCAACACACTCAAGTTTCTGTAATCAAAGACGTGATTGTGCCGTACACACATCTTCTACCCCGTTTGCATTTGTCAGAAAACAAGGAGCGCCACAACCTTCTCTATTTCAAAGGAGCCAAGCATCGGCACCGGGGAGGCCTAGTTAGAGAGAAGTTATGGGATCTATTGAATAATGAGCCCAGTGTTATCATGGAGGAAGGCTTCCCTAATGCGACTGGGAGAGAGCAATCAATACAAGGGATGAGAACATCTGAGTTTTGCCTGCATCCGGCTGGGGACACACCCACTTCATGCCGACTGTTTGATGCCATTCAAAGTCTTTGTATACCTGTTATCGTCAGCGACAACATTGAGCTCCCATTCGAAGGTATGGTGGACTATACAGAATTTTCAGTTTTTGTAGCAGTTGGTGATGCACTTAAACCAAGCTGGATAGTCAATCATCTTCAAAGCTTTTCAAAAAAACAGAAAGACACGTTCCGCCAAAACATGGCTCGAGTGCAGCCCATGTTTGTCTATGATAATGGTCATTCGGGTGGTATTGGCCCTGTACCTATGGATGGTGCAGTGAATCATATATGGAAGAAAGTTTACCAAAAGCTGCCAACGATAAAAGAAGCCATAATTCGAGAGAAAAGAAAACCACCGGGTGTGTTGGTTCCACGACGATGTCAATGGAGGCCTAGTTAG 1437 0.4509 MPPIPKNNNNTSFSIPTLFLFFIIISILSLTFFFFSSYTTTTHSSLSLQPTTSCINVYVADLPRSLNYALLNRYWSFTSDSRIGSDVDSEIRSKSKALEFTEFPPYPENPIIKQYSAEYWIMGDLVTPSKLRTGSFAKRVFDEREADVVFVPFFATISAELQLGMAKGVFRKKVGNEDYQRQSEVVDFVKKTEAWNRSGGRDHVFVVTDPVAMWHVKDEIAPAILLVVDFGGWYRLDSKLSNCTSSEMIQHTQVSVIKDVIVPYTHLLPRLHLSENKERHNLLYFKGAKHRHRGGLVREKLWDLLNNEPSVIMEEGFPNATGREQSIQGMRTSEFCLHPAGDTPTSCRLFDAIQSLCIPVIVSDNIELPFEGMVDYTEFSVFVAVGDALKPSWIVNHLQSFSKKQKDTFRQNMARVQPMFVYDNGHSGGIGPVPMDGAVNHIWKKVYQKLPTIKEAIIREKRKPPGVLVPRRCQWRPS* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3569 478 Pfam Exostosin family 55 397 IPR040911 -
Mtr1g3569 478 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 14 466 IPR004263 GO:0006486|GO:0016757
Mtr1g3569 478 PANTHER EXOSTOSIN FAMILY PROTEIN 14 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3569 Mtr-Chr1 47408849 47413447 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3569 - - adu:107467786 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3569 1 47408849 47413447 Mtr1g3569 1 47408849 47413447 ECH