Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3547 ATGGGCGACAAACGCAAGAAGCACCGTCGTTCGCGTGATTCAACCTCCCCTTCTTCATCCTCTCCCTGCACTGACTCCGATTCCGACTCCGACCACTCTTCTCGTCGCCGCCGTCATCGCCGTGAAAAGGAACGACGCAGAAAAAGCGACGGAAGCTCCAAACGTGAAAGAGAGAGCAAGAGAAAGGAAAAGAGAAAACGGAGAGACAGAGATAGGAGAAAATCCAAGAGGCATCATCACTATTCCGATGACTCCCAATCTTCCGAAGATGAAATTCATCCCCAAATCGCACTCCGTGAAATGATGACTGAGTTTCCCAATGTTGGCAACGATTTGATGCAGTTATTGCAAATGATTGATAATGGACAAGCTGTGGACATAAAGGATATATCAGAGAAATCTCTAGTGAAGCATTTAAAGAGGCTTTTCATTTCCTTAAATCTTAAGGAAAATGGGGATAGAGTTTTTTTACTTCCTTCTAAAGCCTCCCCTACTTTAGATGTTGTTGGTCCTCTAATTCAATCTATGCATCCTGGGAATGATCAAGCTGATCCTTCTGCGGAATTTCCCGAAACATGTTCGGTTTCAGCTGAGCAGATGGTAGATGACCATTCGACAGAACCTCCTGAGGATCATTCTGTTGGTCCTAGAAAAAGGGTGATTGGCCCTGCAATGCCGTCTGCTGAGTTACTTGCTGCTGCTGCCAAATTAACAGAAGCACAAAATGAATTCAGAGAAGCTGATTTGGACGACGATACTGAACTATTTGTGGGACCTCCACCTCCTGCTATGGTTTCTGAAGCAGAATCAGCTAACGAAGCAGAACGTTTTGAAGAGGTCACCAGGATAATGGAAGTTGAGATCAACAGCCCATATGATGTTCTAGGAGTTAACCATAATATGTCCGATGGTAACATAAAGAAAAAGTACTGGAAGATATCACTATTAGTTCATCCAGATAAATGCTCTCATCCACAAGCCAATCAAGCATTTATTAAATTAAATAAAGCTTTCAAAGAGTTACAAGATCCAGAAAAGCGGAAAGAAATGGATGAGAAAATCAAACTCAAGCAAGAACAGGAGGACTTAAAGGCTGAACTTAAAGTCATGCGAGAGGCTGCACTGTGGAGAAGATCTCAAGGTATATCCATGGAGGGCGATGATGAGCTTCTGGCACAGACAGAGGTTAAAGTGGATCCCAAAAGAGATGAATGGATGACAACACTGCCTCCGGAGAGGAAACCTGGTGGTGTGAGCATGCAATCGACCCAATTTAGCCGGGGCACAAAGGAAGGTAGAGGAGACACTAGTATTTGGACAGACACCCCGACTGACAGAGCTCAGAAAGCAAAGATGAATTATTTGGAAGCATACAATCAGGCCACTGCACTAGCCTCAAACGAAGAAGAAAAGAAAAGGGCTAGTACGGATGCAGATTTGGTGGACAAATATAACAAAGCAAAACGATCAAAAACGTTGGTGCAAAAACATCGAGAAGAGGTTGCTAGCAAATCCAAGAAAAAGTCCAACCAACAGACAGATAAGGGAGAATGGGTGGGTCAACATCCATGGAAGCCATGGGACCGTGAAAAGGATCTGGGAGCTGGGAGGATGAAAGTAAAACTTGATGCAGAAGGCATGTCTGAGGGATTATCTTCAAGGTTTAATTCTGGAAACTTTCAAAGGAACTTCCTTTGA 1698 0.4382 MGDKRKKHRRSRDSTSPSSSSPCTDSDSDSDHSSRRRRHRREKERRRKSDGSSKRERESKRKEKRKRRDRDRRKSKRHHHYSDDSQSSEDEIHPQIALREMMTEFPNVGNDLMQLLQMIDNGQAVDIKDISEKSLVKHLKRLFISLNLKENGDRVFLLPSKASPTLDVVGPLIQSMHPGNDQADPSAEFPETCSVSAEQMVDDHSTEPPEDHSVGPRKRVIGPAMPSAELLAAAAKLTEAQNEFREADLDDDTELFVGPPPPAMVSEAESANEAERFEEVTRIMEVEINSPYDVLGVNHNMSDGNIKKKYWKISLLVHPDKCSHPQANQAFIKLNKAFKELQDPEKRKEMDEKIKLKQEQEDLKAELKVMREAALWRRSQGISMEGDDELLAQTEVKVDPKRDEWMTTLPPERKPGGVSMQSTQFSRGTKEGRGDTSIWTDTPTDRAQKAKMNYLEAYNQATALASNEEEKKRASTDADLVDKYNKAKRSKTLVQKHREEVASKSKKKSNQQTDKGEWVGQHPWKPWDREKDLGAGRMKVKLDAEGMSEGLSSRFNSGNFQRNFL* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3547 565 Coils Coil 346 373 - -
Mtr1g3547 565 MobiDBLite consensus disorder prediction 59 77 - -
Mtr1g3547 565 MobiDBLite consensus disorder prediction 417 442 - -
Mtr1g3547 565 Gene3D DnaJ domain 272 374 IPR036869 -
Mtr1g3547 565 Pfam Protein of unknown function (DUF3752) 410 555 IPR022226 -
Mtr1g3547 565 SUPERFAMILY Chaperone J-domain 262 348 IPR036869 -
Mtr1g3547 565 MobiDBLite consensus disorder prediction 203 217 - -
Mtr1g3547 565 MobiDBLite consensus disorder prediction 487 534 - -
Mtr1g3547 565 MobiDBLite consensus disorder prediction 187 201 - -
Mtr1g3547 565 ProSiteProfiles dnaJ domain profile. 290 354 IPR001623 -
Mtr1g3547 565 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 565 - -
Mtr1g3547 565 MobiDBLite consensus disorder prediction 179 220 - -
Mtr1g3547 565 SMART dnaj_3 289 346 IPR001623 -
Mtr1g3547 565 MobiDBLite consensus disorder prediction 407 442 - -
Mtr1g3547 565 CDD DnaJ 291 343 IPR001623 -
Mtr1g3547 565 MobiDBLite consensus disorder prediction 1 91 - -
Mtr1g3547 565 Pfam DnaJ domain 291 351 IPR001623 -
Mtr1g3547 565 MobiDBLite consensus disorder prediction 487 513 - -
Mtr1g3547 565 PRINTS DnaJ domain signature 292 310 IPR001623 -
Mtr1g3547 565 PRINTS DnaJ domain signature 310 325 IPR001623 -
Mtr1g3547 565 PRINTS DnaJ domain signature 326 346 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3547 Mtr-Chr1 47072068 47080511 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3547 - - gmx:100788598 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3547 1 47072068 47080511 Mtr1g3547 1 47072068 47080511 ECH