Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3544 ATGGCTCAGCAGAGGCAATCGGGAACGGAGAGGCTTGGGGTGAGAGTAGGGTCTCTGGATCTGCATAGCACCAATGGCTCCAGTGATCATGTTGCTATTGGGATTCGCGGTGGTGTTGGGATTAAGCAGCCGCGGCTCCGGCGATCGGCACGATCCGATAGAGGAGTGCGGTTTTCAGTGATTGCAATCTTGGTTTTTCTCTTCATCGTACTTGTTGTTACTTTCATGGTGTTTTCTTACATTTCTAGAGAAGAATTAAGTAACAAGGGTGATGATACTGATGATATAAAGGGTGATTCTGATTTTCTTACAAATGTACCACGGATAGAGAAGAAAGTTCTTGATTTTGGACATGATTCTGGGGGACGTGGCCGAGATTCGAGGTATTGGGATAAGGATGATAGGAGAAGGGATGGTGGTTATGATGAGGATATGAAGGATCAGATAAGTAAGGATCTTGGAGATGCAAATGCTGACGATGCTAATCGTGTAAAGATGAATCACAGTATTAAGTTTTCCCAGGATGGTTCTCACACGGGTTTAAGGCGAAAAGGTGTTGGCTTGTATAATGAGGCGGGGCGTCATGAATTGAAAAGGTATGAAGCAGAATACGAGGCTTCTTTGAAAAATGTGAGACACTCCGCTGGAGATGGTGAGAAATTACCGCATGATGCTGATATGGAAAAGAAGAATGCGGCAGTCGACATTGATGATGAGTATGATGACTTTTTCGATTCTCACGATCCTCAAACGGAAGACTCTGCTGATAGTGGAAATATGGGAGGGAAACATTCTAATGCACTAAGTTTGGACAGTGAAGTTCAGAATGAATCTCATGATTCTTCTGATATGGGAACTAATGATGATGTTACTCCTGAGGAGGATATTGATGGGGAATCTTCCCTTAACAAAAAAAATTCTCCTGGTGGAAAAACAAATTCTAGACTTTCAGATATTGCAAATGAACGAACCAACAGAAAATCACGTCCTGAAACAAAGAGGAAAGGCAAGCGTCGCAAATACTCAGGTTCGTGTGAGATGAAGGTGTTGAACTCAACATCTCAACTTGTAGAACCACTAGAAAGTCGAAAATTTGCAAGATTTAACTTACAATATGTGGAGACAGAAGAGAAGCCACTGGGAGTAGAACAATGGACGCCAAGATTTGCCGGCCATCAGAGCTTAGAAGAGAGAGAAAATTCATTTTTGGCACGTGATCAAAACATAAAATGTGGTTTTGTTAAAGGCCCTGAAGGTTCACCCAGCACTGGTTTTGACATGTCAGAAGATGATGAAAGTTACATTAGTAGATGCCACATTGCTGTGATTTCATGCATATTTGGAAATTCTGATCGCCTAAGGACCCCGGCCACCAAGACGATCAGTCGTTTGTCAAGAAAGAATGTCTGCTTTGTTATGTTTACCGATGAGATTACAGTGCGGACACTTACTTCTGAGGGCCATCCACCAGATAGAATGGGTTTCATTGGCTTTTGGAAGTTAGTGGTAGTGAAGAATCTACCTTATGATGATATGCGGCGAGTGGGCAAAATACCAAAGTTATTGGCCCATCGACTTTTTCCCTCTGCAAGGTATTCAATTTGGTTGGATAGCAAATTAAGGCTGCAGCTTGATCCTTTACTCATCTTGGAGTACTTCTTGTGGCGAAAGGGTTATGAATTTGCAATATCCAATCACTATGATCGGCATTGTGTTTGGGAAGAGGTAGCACAAAACAAGAAATTGAACAAGTATAATCATACAGTTATAGATCAACAATTTGCATTTTATCGGGCTGATGGACTCCAAAAATTTAATGCATCAGATCTAAACAAGCTTCTTCCAAGCAATGTACCAGAAGGCTCTTTTATTATTAGGGCACACACCCCTATGTCAAATTTGTTCAATTGTCTCTGGTTCAATGAAGTTGAACGATTTACTCCTCGTGATCAGCTGAGTTTTGCATATACATATCAAAAGCTGAGAAGGATGAATCCTGATAAACCTTTTCATCTTAATATGTTCAAGGATTGTGAAAGGAGACACATGGCTAAGTTGTTCCATCATAGAATGGACGAGAAGAGGAATACACGTAAAAAAGCAATTGAATAA 2112 0.4119 MAQQRQSGTERLGVRVGSLDLHSTNGSSDHVAIGIRGGVGIKQPRLRRSARSDRGVRFSVIAILVFLFIVLVVTFMVFSYISREELSNKGDDTDDIKGDSDFLTNVPRIEKKVLDFGHDSGGRGRDSRYWDKDDRRRDGGYDEDMKDQISKDLGDANADDANRVKMNHSIKFSQDGSHTGLRRKGVGLYNEAGRHELKRYEAEYEASLKNVRHSAGDGEKLPHDADMEKKNAAVDIDDEYDDFFDSHDPQTEDSADSGNMGGKHSNALSLDSEVQNESHDSSDMGTNDDVTPEEDIDGESSLNKKNSPGGKTNSRLSDIANERTNRKSRPETKRKGKRRKYSGSCEMKVLNSTSQLVEPLESRKFARFNLQYVETEEKPLGVEQWTPRFAGHQSLEERENSFLARDQNIKCGFVKGPEGSPSTGFDMSEDDESYISRCHIAVISCIFGNSDRLRTPATKTISRLSRKNVCFVMFTDEITVRTLTSEGHPPDRMGFIGFWKLVVVKNLPYDDMRRVGKIPKLLAHRLFPSARYSIWLDSKLRLQLDPLLILEYFLWRKGYEFAISNHYDRHCVWEEVAQNKKLNKYNHTVIDQQFAFYRADGLQKFNASDLNKLLPSNVPEGSFIIRAHTPMSNLFNCLWFNEVERFTPRDQLSFAYTYQKLRRMNPDKPFHLNMFKDCERRHMAKLFHHRMDEKRNTRKKAIE* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3544 703 MobiDBLite consensus disorder prediction 240 344 - -
Mtr1g3544 703 MobiDBLite consensus disorder prediction 120 147 - -
Mtr1g3544 703 Coils Coil 190 210 - -
Mtr1g3544 703 MobiDBLite consensus disorder prediction 253 275 - -
Mtr1g3544 703 Pfam Protein of unknown function (DUF616) 370 689 IPR006852 -
Mtr1g3544 703 PANTHER ALKALINE CERAMIDASE-RELATED 23 702 IPR006852 -
Mtr1g3544 703 MobiDBLite consensus disorder prediction 302 319 - -
Mtr1g3544 703 PANTHER TRANSMEMBRANE PROTEIN (DUF616) 23 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3544 Mtr-Chr1 47024503 47032501 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3544 - - gmx:100797815 1057.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3544 1 47024503 47032501 Mtr1g3544 1 47024503 47032501 ECH