Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3520 ATGGTGTTAGATAACGACCCAGTTGAGTCTTTTTTCAATTCCATTCAAGTTATGAAGGAATCACTGTCACCACTTGAAGTGGGTTTTCGCAAAGCTGCAAAGGATTTTGAGCATTGTTTTGCTAAGAATAAGACACAAGGTGTTTGTTTAATTGCTCAAGTGAAAGATGGTGGTGATTTTCAGATCTGTGATGTTAAGAAGAAAAAAGGGTTGTCAATGAAAGTTCCTCTGAAGGCTTTTTTGGGTAAGTTTTCACAGAATTCAGAAAAATTGAATAAAACTCAAGTGGTTAAGGAGAATGAGTCTTCTTGTAGTAATTGTTTGAAGTTTTCTGTGACTTGGTCTTTGTTGGTTAGTGGGTTTATTCAGTCTTTGCCAATTCCTTTTAAATCTGTGAAGAAGAGAGGTCAGAAAGTGTGTGATGAAGATAGTCATAAGGAGAAGTGTTCATGCATGAAACCAAGTTTATCACCATGTGAAATGAAGCATAATGAGTCAAAGGGTAGAACAATTAAGGAAAAAGTTGTGAAGAGGAAAGATGGAAAAGAACATGTTTCACTTGAATGTGTTATAGGTTTTATCTTTGATCAGTTATCTCATACACTTCAGAGTCTTGATCAAGGAATCAATGGATTGCAAGAGAAAAATGATGAACTTGAGTGTGGGAAGGCTTCATTGGATTCAGCTCCTTTTGGTCATGTGAATGCATTCACTAGCTTCTTGGAAGGGCATAAAGTGGATGTGAATGGTTTCTTGGGGAATTTGAATTTTGCAAAGGTGGGTGGTGTGCCATCAAGTGTAGCTGGAGAAGAAATTGCTTCACAAAATGAAATGGGAGATAGTGCTAATGATGAAACTAAAGAAGAAAGTGTGGGAATTTCGGCGCAGAAGGTTGCTTCTAACATATTCAGTATTCCATTAACGAATGTGGAGCGTCTAAAGACTACACTTTCCACGGTTTCATTGACTGAGTTGATTGAAATGCTACCGCAGCTCGGGAAAACAACGAAAGACCATCCTGATAAGAAGAAGCTATTCTCTGTACAAGATTTCTTTAGATACACAGAGTCTGAAGGGAGGAGATTCTTTGAGGAGCTGGATAGAGATGGTGATGGCCAAGTAACTTTAGAAGATCTCGAAATTGCAATGAGAAGGAGAAAGCTTCCACGAAGATATGCTAAAGAATTCATGAGCCGTACTAGAAGTCACTTGTTTTCTAGGTCTTTTGGTTGGAAACAATTCTTATCATTCATGGAACAAAAGGAGCCTACAATTCTTCGTGCATACACTTCTCTGTGTTTAACCAAGTCTGGGACATTGAAGAAAAGTGAAATATTGGAGTCACTAAAGAATTCAGGACTGCCTGCAAATGAAGACAATGCTGCTGCTATGATGCGATTTCTAAATGCAGACACAGAAGAATCTATTTCATATGGACATTTCCGCAATTTCATGCTTCTGCTTCCCTCGGATCGTCTTCAAGAGGATCCTAGGAGTATTTGGTTTGAAGCTGCAACTGTAGTTGCTGTTCCACCATCCGTCGAAATTCCTGCTGGAAGTGTTCTAAGATCTGCATTGGCCGGTGGCCTTTCTTGTGCCCTGTCATGTGCATTACTGCATCCAGTTGATTCAATCAAGACTCGAGTACAAGCATCATCCATGTCCTTCCCTGAAATAATTGCTAAGCTGCCAGAGATTGGGACGCGTGGTTTATACAGGGGTTCAATCCCTGCAATTCTTGGACAGTTTTCAAGCCATGGCCTGCGAACTGGGATATTTGAAGCAAGTAAATTGGTGTTGGTAAATGTTGCTCCAAACTTACCTGAACTCCAGGTACAATCTATAGCATCATTCTGTAGCACATTTTTGGGAACAGCTGTGAGAATTCCCTGCGAGGTGTTAAAGCAGAGATTGCAGGCTGGTCTTTTCAACAATGTGGGTGAGGCTTTGGTGGGGACTTGGCAGCAAGATGGTCTTAAGGGTTTTTTTCGTGGAACTGGAGCCACTCTTTGTCGAGAGGTTCCATTTTATGTTGCTGGCATGGGGCTTTATGCTGAATCAAAAAAGGGTGTCCAAAAACTATTAGGGCGGGAACTCGAGGCCTGGGAAACAATTGCAGTCGGAGCTTTATCCGGTGGCTTGGCAGCTGTTGTTACGACGCCGTTTGACGTCATGAAAACTAGAATGATGACCGCACAGGGTCGATCTGTGTCAATGTCCATAGTAGCCTTCTCTATACTCCGTCATGAGGGACCCCTTGGCTTATTCAAAGGAGCAGTTCCTAGGTTCTTTTGGATTGCTCCTCTTGGTGCCATGAACTTTGCAGGTTATGAGTTAGCAAGGAAAGCCATGAATAAAAACGATGAGGCTAAGACCGGAAATTTAGAGTAA 2391 0.4132 MVLDNDPVESFFNSIQVMKESLSPLEVGFRKAAKDFEHCFAKNKTQGVCLIAQVKDGGDFQICDVKKKKGLSMKVPLKAFLGKFSQNSEKLNKTQVVKENESSCSNCLKFSVTWSLLVSGFIQSLPIPFKSVKKRGQKVCDEDSHKEKCSCMKPSLSPCEMKHNESKGRTIKEKVVKRKDGKEHVSLECVIGFIFDQLSHTLQSLDQGINGLQEKNDELECGKASLDSAPFGHVNAFTSFLEGHKVDVNGFLGNLNFAKVGGVPSSVAGEEIASQNEMGDSANDETKEESVGISAQKVASNIFSIPLTNVERLKTTLSTVSLTELIEMLPQLGKTTKDHPDKKKLFSVQDFFRYTESEGRRFFEELDRDGDGQVTLEDLEIAMRRRKLPRRYAKEFMSRTRSHLFSRSFGWKQFLSFMEQKEPTILRAYTSLCLTKSGTLKKSEILESLKNSGLPANEDNAAAMMRFLNADTEESISYGHFRNFMLLLPSDRLQEDPRSIWFEAATVVAVPPSVEIPAGSVLRSALAGGLSCALSCALLHPVDSIKTRVQASSMSFPEIIAKLPEIGTRGLYRGSIPAILGQFSSHGLRTGIFEASKLVLVNVAPNLPELQVQSIASFCSTFLGTAVRIPCEVLKQRLQAGLFNNVGEALVGTWQQDGLKGFFRGTGATLCREVPFYVAGMGLYAESKKGVQKLLGRELEAWETIAVGALSGGLAAVVTTPFDVMKTRMMTAQGRSVSMSIVAFSILRHEGPLGLFKGAVPRFFWIAPLGAMNFAGYELARKAMNKNDEAKTGNLE* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3520 796 ProSiteProfiles EF-hand calcium-binding domain profile. 354 389 IPR002048 GO:0005509
Mtr1g3520 796 Coils Coil 202 222 - -
Mtr1g3520 796 Gene3D - 436 507 - -
Mtr1g3520 796 Pfam Mitochondrial carrier protein 699 787 IPR018108 -
Mtr1g3520 796 Pfam Mitochondrial carrier protein 520 600 IPR018108 -
Mtr1g3520 796 Pfam Mitochondrial carrier protein 613 692 IPR018108 -
Mtr1g3520 796 SUPERFAMILY Mitochondrial carrier 520 778 IPR023395 -
Mtr1g3520 796 ProSiteProfiles Solute carrier (Solcar) repeat profile. 519 599 IPR018108 -
Mtr1g3520 796 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 142 788 - -
Mtr1g3520 796 ProSitePatterns EF-hand calcium-binding domain. 367 379 IPR018247 -
Mtr1g3520 796 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN-LIKE 142 788 - -
Mtr1g3520 796 Gene3D - 270 424 - -
Mtr1g3520 796 ProSiteProfiles Solute carrier (Solcar) repeat profile. 608 690 IPR018108 -
Mtr1g3520 796 Gene3D Mitochondrial carrier domain 523 795 IPR023395 -
Mtr1g3520 796 ProSiteProfiles Solute carrier (Solcar) repeat profile. 699 783 IPR018108 -
Mtr1g3520 796 SUPERFAMILY EF-hand 360 489 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3520 Mtr-Chr1 46762303 46769570 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3520 1 790 EF-hand Containing Proteins AT2G35800 64.586 0.0 1039
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3520 - - gmx:100807842 1256.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3520 1 46762303 46769570 Mtr1g3520 1 46762303 46769570 ECH