Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3407 ATGTGTCTAATTTGCAGAAAGAGAGAGAAGATGCAGAAAATGAAGAACCTTGGGAGTATTGGAAGCAGTGGGAGGTTTTCAACAGAAGAATGTGAAGATGAGGATGTTTCAAAATTGGCCATTTCCACATTACAAGCTAAGGAAGAAGAGATTGAGAGGAGAAAGATGGAGGTGAAAGAGAGAGTTGAACTTCAACTTGGACGTGCCGAAGAAGAGACAAGGCGTTTGGCTCACATTTGGGAAGAGCTTGAAGTGATGGAAGATCCTATGAGGAAGGAAGTCGCAATGGTGCGTAAAAAAATTGACTTGGCCAACAAAGATGTAAAGCAACTTGGACAAAACTACCAGAAAAAGGAGAAAGAGTACAAAGAAGCCTTGGAAGCTTTCAATGAAAAGAACAAAGAGAAGAATCATTTGGTAGCGACACTAACTGAGATGCTGGCTGAGAGTGAAAGAATAAGGATGAAGAAACTGGAGGAGCTATGCAAGACCATAGAGTCTGTGTCACTAAAACAATAA 519 0.4085 MCLICRKREKMQKMKNLGSIGSSGRFSTEECEDEDVSKLAISTLQAKEEEIERRKMEVKERVELQLGRAEEETRRLAHIWEELEVMEDPMRKEVAMVRKKIDLANKDVKQLGQNYQKKEKEYKEALEAFNEKNKEKNHLVATLTEMLAESERIRMKKLEELCKTIESVSLKQ* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3407 172 Coils Coil 101 135 - -
Mtr1g3407 172 Coils Coil 41 61 - -
Mtr1g3407 172 Pfam Transcriptional activator 15 167 IPR007033 -
Mtr1g3407 172 PANTHER RAB6-INTERACTING PROTEIN GORAB 11 168 IPR007033 -
Mtr1g3407 172 PANTHER RAB6-INTERACTING GOLGIN (DUF662) 11 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3407 Mtr-Chr1 45307461 45308859 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3407 - - gmx:100794044 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3205 7 49085514 49087941 Mtr1g3407 1 45307461 45308859 ECH
Mtr1g3407 1 45307461 45308859 Mtr1g3407 1 45307461 45308859 ECH