Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3281 ATGATGAGTCAGAAACTTTGTGTAATGGCTTCTCATGGATTCCCATCTCAAGAATATGCCATGAAGGGTTGTCAACAATTGGTGCCTTGTTACGCACCAAAACCAGATATTGTTAGATATCAGAGTCCTAATCTGAGGTTAAATTCATTTGAGGAATCAAGAATGACGACATCGAAAGAGTGGTTCAATTCAAATCAGTTTGTTGATTTTGATTTGTCAGCTTTAAAGCCAATGGTTATTGATGTACAAGCAACTTGTCCAAGCACTGTACTTTTCAGCTTTGGCGTTGTTGGTCAATGCACCGAGCATGATAAAACTTCGCTGTGTATCACATCCGAGACTGCTGAAGCAGTTGTAGATGGTGTTCGTAAAGCTTTGTTGTCTGACTTGATGGGTTTGCAACTTTCAGGGATTAATATACCTCAAATGTCATTGCATCCTCTCATCTACCCAAATAGGACTTTCTACATCTCGAAGCCTTTGCTTGATATTTTTCAAGATTCAGCCCTTAGTTCAAAATTTACTGTTCATCTAAATGGTCAAGTTACGTTTATGGGTACAGAAATTGAGATGAAAGATTTTCTTGCTATAGTTGCCGAGTCATACGTATCAAAACGTACACATAATGGTGAAAAACAGTCTATGCTTGTTCCACACTTCAGTAGGCTGAATATAAATGAAGTGGAGGCCAGAAGTATTTCCCCCACATTGGATATTCACTCTACACTGACCGTTCCTTTAAAAAGTCCGGAGAAAGTCAAAGCCAAGCCATCACGAAAAAAGAAAAAGAAAGTAGCCAGGGAGAGGGATCTGTTCAAGAAGAACTACATTCATGCATGTGAGAGCCTTCTGTTCTTGATGGCTGATAAGAGGCATCATCGGGAAACAGCAATTCTTTCACTGAAGAAATCAGGTCCGGAGCTTCCCGAGCTCCTTACACAATTCTCTGCTGGCATTGCTGGTACTGGCCTTGCTGTTGTGCTATCTGTGATCTGCAAACTAGCTTGCGGAAGGGTCCCCTTTTGTGCGTCTAAGGTCTTCAACACAGGGTTGGGTTTTGGGCTTGTTTGGCTTTCTTGGGGAGTAAATAAGCTGAGGGATACAATTGTTAACATAAGCAAGAATACTGGAAAGATGGGATTGAAAGATGAGGAAATGATTCAAAAGGTGGATAAGAGTCTAAAAGAAGTTTACTTTAGAGCTGCAGCGTTGCTAGTAGTGGCAGTGCTAAGGCTTGCTTGA 1242 0.4106 MMSQKLCVMASHGFPSQEYAMKGCQQLVPCYAPKPDIVRYQSPNLRLNSFEESRMTTSKEWFNSNQFVDFDLSALKPMVIDVQATCPSTVLFSFGVVGQCTEHDKTSLCITSETAEAVVDGVRKALLSDLMGLQLSGINIPQMSLHPLIYPNRTFYISKPLLDIFQDSALSSKFTVHLNGQVTFMGTEIEMKDFLAIVAESYVSKRTHNGEKQSMLVPHFSRLNINEVEARSISPTLDIHSTLTVPLKSPEKVKAKPSRKKKKKVARERDLFKKNYIHACESLLFLMADKRHHRETAILSLKKSGPELPELLTQFSAGIAGTGLAVVLSVICKLACGRVPFCASKVFNTGLGFGLVWLSWGVNKLRDTIVNISKNTGKMGLKDEEMIQKVDKSLKEVYFRAAALLVVAVLRLA* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3281 413 PANTHER PROTEIN, PUTATIVE-RELATED 4 413 - -
Mtr1g3281 413 PANTHER OS05G0143300 PROTEIN 4 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3281 Mtr-Chr1 44133090 44136418 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3281 - - gmx:100800200 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3281 1 44133090 44136418 Mtr1g3281 1 44133090 44136418 ECH
Mtr7g2778 7 44468395 44473225 Mtr1g3281 1 44133090 44136418 PCT