Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3274 ATGGCGGCTGGTCCAACAACAACCACCACCACCGATCGACCTACCGTTGTAGGTCCCACAACCACTCCTCTTCAACCACCACCACCAATGCTCGTCTCTGACTCCTACGCCAAAGACGCTATCCTCGCTTGGTTTCACGGCGAGTTCGCCGCTGCCAACGCAATCATCGACGCTCTCTGTTCTCATCTCTCTCACCTCTCCTCCGCCGCTGATTACAGCAATGTTTTCGCCGCTATCCATCGTCGGAGACTCCATTGGATCCAAATCCTTCAGATGCAGAAGTATCACTCCATTGCTGATGTCGCTCTTCAGCTTAAAACAGTAGCTGACAAAAAAAATACCGTTGAGGAGGTTATTCAAAACGACATCGTTGTGATGGAAGAGGAGGAACAGAAAACAGAGGAGAAAGTGATCGACGGTGGTGGTGATGAACACGAGGAGTATGATTCCCCTGAGAGTGAGATTACTGATTCAGGATCACAAGAAAATCAAGCTAATTCGATGAACATTAATATATGTTCCAATCATGAAGAGTGTGAAGGACGTGCTACACAGTTTAAGTTGACAAAAGGTTTTACAGCAAAAGAGTCAGTGAAGGGGCATATGGTGAATGTTGTGAAAGGATTGAAGTTATATGAAGACGTTTTCACTGATTCAGAATTGTGCAAGCTGTCAGATTTTGTGGATGAGATCCATACTGCTGGTCAGAATGGGGAACTGTCTGGTGAAACTTTTATATTATTCAACAAACAGATGAAAGGTAACAAGAGAGAGCTCATTCAGCTTGGTGTTCCAATATTTGGACAGATAAAGGAGGACACAAAAAGTAATATAGAGCCAATTCCGGCACTTCTGCAGCGTGTTATTGATCACTTTATTCAATGGCATTTACTTCCGGAGTACAAAAGACCAAATGGTTGTATCATCAACTTTTTTGAAGAGGGGGAGTTTTCTCAGCCATTCCTGAAACCACCGCATCTGGATCAACCTGTGACCACTCTTCTTCTATCTGAATCAACCATGGCATTTGGGCGTATTCTTATGAGTGAAAACGATGGGAACTACAAGGGACCACTTATGCTGTCATTGAAGAAGGGGTCTCTTCTGGTGATGAGAGGAAACAGTGCTGACATGGCAAGGCATGTCATGTGTCCATCTCCTAACAGAAGGGTAAGCATCACCTTCTTCAGAGTGAGGCCAGACTCCAATCAATGTCAATCACCAACTCCTACCATGACAAGCGCAATGACTATGTGGCAACCTGCCATCGCTAACCCGTATGCTTTGCCAAATGGAGCTTTAAGCTGTGGCTATGATGGTATGGACATGATGATGCCCAAATGGGGAATGCTTCCCGGCCCGATGATGATGCTGACACCTATGCGTCCTATGGCAGTGAATCCCCGCAAACTGGCTGGGGGTGGTACTGGAGTCTTCTTGCCCTGGAATGTTCCTTCCAGAAAACCCACAAAGCATCTTCCACCACGTGCGCAAAAAGGAAGGCTTCTAGCATTGCCTTCTCCTGTTGAGCCACACATTGGAGAGTCCACTTCTGAACCTAGCATTTGTGTTGAAGGATGA 1581 0.4605 MAAGPTTTTTTDRPTVVGPTTTPLQPPPPMLVSDSYAKDAILAWFHGEFAAANAIIDALCSHLSHLSSAADYSNVFAAIHRRRLHWIQILQMQKYHSIADVALQLKTVADKKNTVEEVIQNDIVVMEEEEQKTEEKVIDGGGDEHEEYDSPESEITDSGSQENQANSMNINICSNHEECEGRATQFKLTKGFTAKESVKGHMVNVVKGLKLYEDVFTDSELCKLSDFVDEIHTAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKEDTKSNIEPIPALLQRVIDHFIQWHLLPEYKRPNGCIINFFEEGEFSQPFLKPPHLDQPVTTLLLSESTMAFGRILMSENDGNYKGPLMLSLKKGSLLVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQCQSPTPTMTSAMTMWQPAIANPYALPNGALSCGYDGMDMMMPKWGMLPGPMMMLTPMRPMAVNPRKLAGGGTGVFLPWNVPSRKPTKHLPPRAQKGRLLALPSPVEPHIGESTSEPSICVEG* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3274 526 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 303 400 IPR005123 -
Mtr1g3274 526 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 26 524 - -
Mtr1g3274 526 MobiDBLite consensus disorder prediction 1 19 - -
Mtr1g3274 526 MobiDBLite consensus disorder prediction 507 526 - -
Mtr1g3274 526 MobiDBLite consensus disorder prediction 130 163 - -
Mtr1g3274 526 Gene3D - 192 407 IPR037151 -
Mtr1g3274 526 SUPERFAMILY Clavaminate synthase-like 199 399 - -
Mtr1g3274 526 MobiDBLite consensus disorder prediction 130 144 - -
Mtr1g3274 526 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 26 524 IPR044842 GO:0003729|GO:0006402|GO:0032451
Mtr1g3274 526 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3274 Mtr-Chr1 44056841 44061845 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3274 K10767 - gmx:100791586 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3274 1 44056841 44061845 Mtr1g3274 1 44056841 44061845 ECH
Mtr7g2769 7 44368556 44373541 Mtr1g3274 1 44056841 44061845 PCT