Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3273 ATGAATTTCTTCAAATCCGTTTTCTCCGACGACCCAGATCCACCTCAACCCGAATCCGAACCCAAACCCAACAATGTAGACCAGGATCCAAATTCCGGCGCCGGCGACGGCGACACTTGGAACTTCGGCGGACTCATGAAAACCCTCGCATCCAAATCCGAATCCATAATCGAAACTTACCGTCGCGATCTACAAGAATTCAGCACCGGCTTAAAAAACGAGATCGAAGTTGCTCAAGATTCCGTCGGTGAGATTGGAACCACCGTCATCAAAGGAACGGCTCAGATCATATCTCAAGGTAAGGAAGCAATCCTCGCCGTTAATCTCGATTCCGATTCCGATAATAGCACTGCCACTGCGAATCGCGATTCGAATCGATTGGATTCGAAGCGATATAGTAGGTTTGATGCTCAGGTTCGTGCAATTCAGGGTGATGTTGGGACTTATACTGAGATGCCTGAGGATTTGAGTGAATTTGATGAGTGGAAATTAGGGTTTGTGTTGGATGAGAAAAGTGATGAAATGGAGAAGCTTTCGAGGGAGAATGATGCAATGGAGAGTGTTTACAAGAGGGTTGTTCCGAATGTTGTCGATCATGAAAGTTTTTGGTTTAGGTATTATTACAAGGTTTATAGGTTGAAGAAAGCTGAAGATGTTAGGGCTAGACTTGTTAGAAGAATTTCCAGGGAAGAAGAGGATTTGAGTTGGGATGTTGAAGATGACGATGATGATGTGGAGGAGGAGGAGAATGAAGGTGAAGTTAAAGTTAAATCAGAGATTGTGATCAATAAGGAAATTGGTGGTGAACAATTGGTGGAAAAGGTTGATACTGATTTGAAAATCGGTGCTTCTGGCTCTGGTGCCAGTGATGAGAAGAATTCGAGTGTCGAAGAGGGGCAGCATTTGAGGGAGGAGGAGTTGAAAGTAGAAAAGAAAGACAATGTAATGCAAAGCAATGAACTAGGTGATGAGAAGGATAAGTCTGTTGAAGAATCACGAGTTTTTGAGAACAAGGATGATGATGGCGGTGTTAATAAAGCATCAAAGTCGGTAGTGGATGATGCTGCGAACAAGGAAGTTTCTGTGGGTGAGTCTGATGAGAAAGTGATAGAAAGGAAGGATGGTGATGAAAAACCTTCTAGTAAGAATGAGTCCTCTGTGGTTGAAAGTAAGCACATGGAAAATGAGGAGGAAGAGGATCTTGGGTGGGATGATATTGAGGATCTTAGTGGTATTGATGAAAAGAAGGAAACTCAATCTCAGAGTCAGAGTGATAGCACCAGCAAAGTTGATTTGCTGAAGCGCCTTAGTACTGCAGAGGAAGATGAAGACTTGAGTTGGGACATTGAAGATGATGACGATGAGCCTGCTAAGGCTTGA 1380 0.4355 MNFFKSVFSDDPDPPQPESEPKPNNVDQDPNSGAGDGDTWNFGGLMKTLASKSESIIETYRRDLQEFSTGLKNEIEVAQDSVGEIGTTVIKGTAQIISQGKEAILAVNLDSDSDNSTATANRDSNRLDSKRYSRFDAQVRAIQGDVGTYTEMPEDLSEFDEWKLGFVLDEKSDEMEKLSRENDAMESVYKRVVPNVVDHESFWFRYYYKVYRLKKAEDVRARLVRRISREEEDLSWDVEDDDDDVEEEENEGEVKVKSEIVINKEIGGEQLVEKVDTDLKIGASGSGASDEKNSSVEEGQHLREEELKVEKKDNVMQSNELGDEKDKSVEESRVFENKDDDGGVNKASKSVVDDAANKEVSVGESDEKVIERKDGDEKPSSKNESSVVESKHMENEEEEDLGWDDIEDLSGIDEKKETQSQSQSDSTSKVDLLKRLSTAEEDEDLSWDIEDDDDEPAKA* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3273 459 MobiDBLite consensus disorder prediction 1 42 - -
Mtr1g3273 459 SUPERFAMILY BSD domain-like 132 219 IPR035925 -
Mtr1g3273 459 MobiDBLite consensus disorder prediction 294 347 - -
Mtr1g3273 459 MobiDBLite consensus disorder prediction 275 459 - -
Mtr1g3273 459 MobiDBLite consensus disorder prediction 359 397 - -
Mtr1g3273 459 ProSiteProfiles BSD domain profile. 162 214 IPR005607 -
Mtr1g3273 459 Gene3D BSD domain 123 223 IPR035925 -
Mtr1g3273 459 PANTHER PROTEIN, PUTATIVE-RELATED 1 79 - -
Mtr1g3273 459 PANTHER PROTEIN, PUTATIVE-RELATED 78 453 - -
Mtr1g3273 459 Coils Coil 168 188 - -
Mtr1g3273 459 Pfam BSD domain 162 218 IPR005607 -
Mtr1g3273 459 SMART wurzfinal6 162 214 IPR005607 -
Mtr1g3273 459 Coils Coil 213 233 - -
Mtr1g3273 459 PANTHER SYNAPSE-ASSOCIATED PROTEIN 1 79 - -
Mtr1g3273 459 PANTHER SYNAPSE-ASSOCIATED PROTEIN 78 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3273 Mtr-Chr1 44053324 44055000 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3273 - - gmx:100792113 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3273 1 44053324 44055000 Mtr1g3273 1 44053324 44055000 ECH
Mtr7g2768 7 44366513 44368210 Mtr1g3273 1 44053324 44055000 PCT