Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3261 ATGGCGAAAACCATGATTCATTCATGTTTTCTTCTCTTTTTCTTTTGTTTCTTACACAATCAGCTTATTGTAAACGCGATTTTAGACCCTGCTGATTTTCTAGCTCTTCAATCCATTCGTAAAGCTCTTGAAGACATGCCTGGTTCTGATTTCTTTTCTTCATGGGATTTCACTGCTGATCCATGCAACTTCTCCGGTGTGTTTTGTGATTCTGATAAGGTTATTTCTCTCAACCTCGGTGATCCTAGAGCCGGTTCAGCTGGTTTAACCGGTCGATTAGACCCTGCCATTGGTAAGCTTTCTTCTCTGGCTGAGTTTACCGTTGTTCCGGGAAGAATATATGGTCCTCTTCCTCAAACCATTTCAAGCTTGAAGAATCTCAGGTTTCTTGGTGTTAACAGAAACTTCATCTCCGGTGAGATTCCGGCGGAGTTAGGTGAGTTACGCAGTCTTCGAACTATTGATCTTAGTTACAATCAGCTAACCGGAAAAATTCCTCCGACGGTGGGTTCATTACCGGGGTTAACCAATCTCATTCTCTGTCACAACCGTTTAACCGGTTCACTTCCCCGGTTTGATTCTCAAAGCTTAAGCCGGTTGGACCTAAAGCACAACTCTCTCACCGGTTCGATTGGTCCAAATTTTCTCCCTGCGTCACTTCAGTATCTCTCATTGTCATGGAATCAATTCACCGGCTCAATGGACCGGGTTCTAACCCGGCTTAATCAGTTAAACTATTTAGACCTGAGTCTGAACCAATTCACTGGACCTCTTCCGGGTAAGGTATTCTCATTCCCACTGACAAATCTCCAATTAGAAAGAAACCAGTTTACCGGTTCAGTTGAACCGGTGGATCAAGTTGCAATTCCAACCGTTGATCTTAGCTTTAACCGGTTATCTGGTCAAATATCACCTATGCTGGCCAATGTGCAGAATCTTTACCTGAATAACAACCGGTTCACGGGTCGGGTACCGGCTAGTTTTGTGGAGCGGTTATTGGATGCAAGCATACAGATATTATATTTGCAGCATAATTATTTAACTGGAATTGAGATTAGTCCAACGGCTGTAATTCCAGAGAGAAGTTCACTGTGTATGCAGTATAATTGCATGGTCCCTCCCGTAGAGACTCCCTGCCCTTTTAGAGCTGGGAAGCAGAAAACAAGGCCTACTACACAGTGCAATCAGTACAAGGGATAG 1200 0.4375 MAKTMIHSCFLLFFFCFLHNQLIVNAILDPADFLALQSIRKALEDMPGSDFFSSWDFTADPCNFSGVFCDSDKVISLNLGDPRAGSAGLTGRLDPAIGKLSSLAEFTVVPGRIYGPLPQTISSLKNLRFLGVNRNFISGEIPAELGELRSLRTIDLSYNQLTGKIPPTVGSLPGLTNLILCHNRLTGSLPRFDSQSLSRLDLKHNSLTGSIGPNFLPASLQYLSLSWNQFTGSMDRVLTRLNQLNYLDLSLNQFTGPLPGKVFSFPLTNLQLERNQFTGSVEPVDQVAIPTVDLSFNRLSGQISPMLANVQNLYLNNNRFTGRVPASFVERLLDASIQILYLQHNYLTGIEISPTAVIPERSSLCMQYNCMVPPVETPCPFRAGKQKTRPTTQCNQYKG* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3261 399 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Mtr1g3261 399 Gene3D Ribonuclease Inhibitor 195 370 IPR032675 -
Mtr1g3261 399 SUPERFAMILY L domain-like 49 371 - -
Mtr1g3261 399 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 8 396 - -
Mtr1g3261 399 Pfam Leucine Rich Repeat 150 172 IPR001611 GO:0005515
Mtr1g3261 399 PANTHER LRR RECEPTOR-LIKE KINASE 8 396 - -
Mtr1g3261 399 Gene3D Ribonuclease Inhibitor 31 194 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3261 Mtr-Chr1 43919904 43921678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3261 89 329 Receptor kinase-like Gene Family AT5G62230 30.924 1.23e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3261 - - gmx:100800224 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3261 1 43919904 43921678 Mtr1g3261 1 43919904 43921678 ECH
Mtr7g2755 7 44268746 44270126 Mtr1g3261 1 43919904 43921678 PCT