Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3249 ATGAGTGAAAGTACTATGAAGATGAAGAATCAACCGTCACAGTCACACTGGTGGTGGCTTGATGACAACACCACCGTTAGAAGATCAGCATGGCTTCAATCTACACTTACTGAGCTGAATGAGAAGACAAAGGCAATGTTGAAATTAATTGAAGGAGATGCAGATTCCTTTGCACAAAGAGCTGAGATGTTTTACAAGAAGAGGCCAGAGCTTGTGAGCATGGTTGAAGATTTCTATAGGAAACACCGCTTGTTAGCTGAACGGTTTGATCAAGTCAGGCCTGAATCCGGAATTCGCCTGCTCACCCCTTCTGCTTCACTTAAGCATTCTCAACCAGAGAAGTTGGTGAGTTTTGATGATGATCGTGGGTATGATAGCTATTCTGAGAGTTGCGATGTAGAGGAATCTGTGAAATCGGAAATTGATGATCCTGAGCATGAAGAGGAAGTTCAGTCCGTGGATGCAAATGAAGTGATGAAGCTGACAAGCGAAACTGAGAGACTCGGTGAAGAGAAGAAAACTCATAAGGAACACATCAAGCAGAAAGATGACATTCTTGATGAAGTAATGAAATTAAGAGAAGAGATAGAACTACTCAGAAAAGAGAATGAAGCGCATAAGGACAAACTCAAGCAGAAAGAGACCATTAGTAATGAAGTAGTAAAGAAGTTGAGGGAAGAAATAGAACAACTGAAGAAAGTGAATAATGCACAGAAGGATGGACTCAATCAGAAAGATACCATTTGTAATGACGTAATGAAGTTGAGGGACGAGATTAAACAACTCGAGAAAGAAAATGAAGCACAGAAGAATGAACTCAAGCAGAAAGGTACCATCAATAATGAAGTAATGAAGCTGAGGGAAGAAACAGATGAACTCAAGAAAGGGAATGAAACACTGAAGCTTGAACTGAAGCACAAAGATGATATTAGTAATGAACTAATGAAGTTGAAGGAGGAGATAGAACGACTCGAGAAAGAGAATGAAGCGCAAAAGGCTGAACTCAAAGAGAAAGATACCATATGCAATGAGGTAGTGAAGTTGAGGGAAGAGAATGAAGCTCAGAGAGATGAACTGAAGCAGAAAGATACCATTTGCAATGAAGTAATGAAGTTGAGGGAAGAATTAGAAAGACACAAGAAAGAGAATGAAGCAAAAAAGAGAGAAAGTTTTAGAGAATATACCATTTGTGATGAAGTAATGATGTTGATGGAAGAGAGAGAAAGTTTTAGAGAAGAGAATAGGACTCAGAAGAATGATCTGAAGCTGAAAGACAAAGAGAAAATAGAGGTAATAAGACAGCTGAGTTCAACAATAGATATGCTGAAGCAGGAAAATGTAAAAATGAGAAGCTTCATAGCTAAGGAATCTGCCAAGAAATGGAAGACCCCATTTGAGTTCAACAAACTTATTGAAACATTCTCAGGGAAATTGCTTAAGGGGATTCCAAGGAATAAGCCTAGTATTGTAGCTCTCTAG 1479 0.3895 MSESTMKMKNQPSQSHWWWLDDNTTVRRSAWLQSTLTELNEKTKAMLKLIEGDADSFAQRAEMFYKKRPELVSMVEDFYRKHRLLAERFDQVRPESGIRLLTPSASLKHSQPEKLVSFDDDRGYDSYSESCDVEESVKSEIDDPEHEEEVQSVDANEVMKLTSETERLGEEKKTHKEHIKQKDDILDEVMKLREEIELLRKENEAHKDKLKQKETISNEVVKKLREEIEQLKKVNNAQKDGLNQKDTICNDVMKLRDEIKQLEKENEAQKNELKQKGTINNEVMKLREETDELKKGNETLKLELKHKDDISNELMKLKEEIERLEKENEAQKAELKEKDTICNEVVKLREENEAQRDELKQKDTICNEVMKLREELERHKKENEAKKRESFREYTICDEVMMLMEERESFREENRTQKNDLKLKDKEKIEVIRQLSSTIDMLKQENVKMRSFIAKESAKKWKTPFEFNKLIETFSGKLLKGIPRNKPSIVAL* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3249 492 Pfam KIP1-like protein 17 90 IPR011684 GO:0003779
Mtr1g3249 492 Coils Coil 283 393 - -
Mtr1g3249 492 PANTHER PROTEIN NETWORKED 3A-RELATED 351 491 - -
Mtr1g3249 492 PANTHER PROTEIN NETWORKED 3A-RELATED 14 304 - -
Mtr1g3249 492 Coils Coil 221 241 - -
Mtr1g3249 492 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 15 96 IPR011684 GO:0003779
Mtr1g3249 492 Coils Coil 175 216 - -
Mtr1g3249 492 Coils Coil 245 279 - -
Mtr1g3249 492 PANTHER PROTEIN NETWORKED 4A 351 491 - -
Mtr1g3249 492 PANTHER PROTEIN NETWORKED 4A 14 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3249 Mtr-Chr1 43787802 43791310 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3249 - - cam:101504474 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3249 1 43787802 43791310 Mtr1g3249 1 43787802 43791310 ECH
Mtr7g3386 7 50964501 50967547 Mtr1g3249 1 43787802 43791310 PCT