Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3242 ATGGAGAAGGTGATGAGGTTGGCTACAGAAAAGGGTGTTGTGATTTTCACCAAGAGCTCTTGTTGTTTGTGCTATGCAGTGAACATTTTGTTTCAAGAAATTGGAGTGTTCCCTGTGGTTCATGAAATTGACAAAGATCCTGAAGGAAAAGAAATGGAGAAAGCTATAACAAAGTTGGGTTGTAATGCACCTGTCCCTGCAGTATTCATTGGAGGAAGGCTTGTGGGGTCCACCAATGAAGTAATGTCCCTACACCTAAGTGGTTCACTTGTTCCACTACTTAGGCCATACCGAATTTAA 300 0.42 MEKVMRLATEKGVVIFTKSSCCLCYAVNILFQEIGVFPVVHEIDKDPEGKEMEKAITKLGCNAPVPAVFIGGRLVGSTNEVMSLHLSGSLVPLLRPYRI* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3242 99 PANTHER GLUTAREDOXIN 1 99 IPR011905 -
Mtr1g3242 99 CDD GRX_GRXh_1_2_like 13 93 - -
Mtr1g3242 99 ProSiteProfiles Glutaredoxin domain profile. 1 99 - -
Mtr1g3242 99 Gene3D Glutaredoxin 1 98 - -
Mtr1g3242 99 Pfam Glutaredoxin 13 75 IPR002109 -
Mtr1g3242 99 SUPERFAMILY Thioredoxin-like 1 97 IPR036249 -
Mtr1g3242 99 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 96 IPR011905 -
Mtr1g3242 99 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3242 Mtr-Chr1 43697218 43697850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3242 1 95 Miscellaneous Gene Families AT4G15670 50.526 5.71e-35 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3242 K03676 - gmx:100500442 179.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3242 1 43697218 43697850 Mtr1g3242 1 43697218 43697850 ECH
Mtr7g3393 7 51021482 51022307 Mtr1g3242 1 43697218 43697850 PCT
Mtr1g3242 1 43697218 43697850 Mtr7g3395 7 51044918 51045466 PCT