Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3240 ATGGACATGATTACAAGGATGGTAAGTGATAAACCTGTGGTGATATTCAGCAAGAGCACATGTTGTTTGAGCCACTCCATTATGACATTGATACGAAGCTTTGGTGCAAACCCAATTGTTTATGAGCTTGATGAGATAACAAATGGGACACAGATTGAAAGAGCACTGATTCAGCTAAGGTACCAACCAAGTGTACCAGCTGTGTTTATTGGCCAACAATTCATTGGTGGCTCTAAAAGAATCATGACCCTTCATCTTCGGAATGAGTTAGTACCTATGCTCATGAATGCCGGAGCTATATGGATTTAA 309 0.4045 MDMITRMVSDKPVVIFSKSTCCLSHSIMTLIRSFGANPIVYELDEITNGTQIERALIQLRYQPSVPAVFIGQQFIGGSKRIMTLHLRNELVPMLMNAGAIWI* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3240 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Mtr1g3240 102 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 101 - -
Mtr1g3240 102 Pfam Glutaredoxin 13 75 IPR002109 -
Mtr1g3240 102 Gene3D Glutaredoxin 2 101 - -
Mtr1g3240 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Mtr1g3240 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Mtr1g3240 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Mtr1g3240 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Mtr1g3240 102 CDD GRX_GRXh_1_2_like 12 93 - -
Mtr1g3240 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 102 IPR011905 -
Mtr1g3240 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3240 Mtr-Chr1 43671586 43672012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3240 1 102 Miscellaneous Gene Families AT4G15690 55.882 2.86e-41 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3240 K03676 - gmx:100811394 169.088
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3240 1 43671586 43672012 Mtr1g3240 1 43671586 43672012 ECH
Mtr7g3395 7 51044918 51045466 Mtr1g3240 1 43671586 43672012 PCT
Mtr1g3240 1 43671586 43672012 Mtr7g3396 7 51051145 51052012 PCT