Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3177 ATGTCAAGTGAAAATCAAATACACGATGCAGAAGAAGAAGAAGAAGAAAGAAGACCTCTCATCGATTCCTCAATTCTCACCCTCACCGTCCATGAAAATGAATTGCCACCTGTCTCGGTTCCTAATCAACGCCTTGTTTCCCTCGATGTCTTCCGTGGTCTCACTGTTGCGCTGATGATATTAGTGGATGATGTTGGACGGGCTTTCCCATCCTTGAATCATTCTCCATGGTTTGGAGTCACACTTGCGGATTTTGTAATGCCTTTTTTTCTCTTTGGGGTTGGCGTTTCCATCGCTTTGGTCTTCAAGAAAGTCTCTAGCAAACAAAATGCCACAAAAAAGATAATTTCGAGGACGATTAAGCTTTTTCTTTTGGGCCTCTTGCTACAAGGTGGGTATTTCCATGGCCGCGGTAATTTAACTTATGGACTTGATTTGACCAAGTTACGCTGGTTTGGTGTACTTCAGAGGATATCCATTGGATATTTCTTGGCCTCAATGTCAGAGATTTGGCTTGTGAACGGTAATATTTTGGTTGATTCACCAGCAGCTTTTGTCAGGAAATACTCCATCCAGTGGATTTTTTCAATTTTACTTTGCTCAGTATATCTTTGCTTGCTCTATGGCCTCTATGTTCCAAATTGGGAGTTCGAACATTCTAACTTGTTGTGGCCTGGTCGTGTATCAACTATTCAAAATGTTCATTGTGATATGAGGGGTAGCCTTGATCCTCCTTGTAATGCTGTGGGATTTATTGATAGATTAATTCTTGGTGAAGATCATATGTACCAGCGTCCTGTCTACAGAAGAACAAAGGAGTGCAGTGTCAATTCTCCTGATTATGGACCCTTGCCTCCAGATTCACCTGGATGGTGCCTTGCACCATTTGACCCGGAGGGTATTTTGAGTTCACTGATGGCTGCCATTACTTGTTTCGTGGGATTGCAATTTGGGCATATACTTGTAATTTTTCAGGCACACAAGCAGAGGGTACTCCTTTGGTCCGTGTTTTCCTTCTCTCTATTGGTAGTCGGATATGTTCTGGAAATTTTAGGAATTCCTTTATCAAAAGCGCTGTACACATTAAGCTTCATGTTCATCACCGCCGGGGCATCGGGCTTGGTTTTGACTGCTATATACTACATTGTTGACATAAAACAACTCAGAAAGCCTACAGTTTTACTGCAATGGATGGGAATGAACGCCCTTATCGTATATGCATTGGCTGCTTGTGACATTTTCCCAGCAGTTATCCAGGGTTTCTATTGGCGCTCTCCTGAAAATAACTTGGTTGACGCCAGTGAAGCTTTAATACAGAATATATTACATTCCGAGAAGTGGGGTACACTGGCCTTTGTAATAATTGAGATTTTATTCTGGGGTCTTTTGGCTGGTTTCCTCCACAAGAAAGGGATATATATAAAATTGTAA 1431 0.4186 MSSENQIHDAEEEEEERRPLIDSSILTLTVHENELPPVSVPNQRLVSLDVFRGLTVALMILVDDVGRAFPSLNHSPWFGVTLADFVMPFFLFGVGVSIALVFKKVSSKQNATKKIISRTIKLFLLGLLLQGGYFHGRGNLTYGLDLTKLRWFGVLQRISIGYFLASMSEIWLVNGNILVDSPAAFVRKYSIQWIFSILLCSVYLCLLYGLYVPNWEFEHSNLLWPGRVSTIQNVHCDMRGSLDPPCNAVGFIDRLILGEDHMYQRPVYRRTKECSVNSPDYGPLPPDSPGWCLAPFDPEGILSSLMAAITCFVGLQFGHILVIFQAHKQRVLLWSVFSFSLLVVGYVLEILGIPLSKALYTLSFMFITAGASGLVLTAIYYIVDIKQLRKPTVLLQWMGMNALIVYALAACDIFPAVIQGFYWRSPENNLVDASEALIQNILHSEKWGTLAFVIIEILFWGLLAGFLHKKGIYIKL* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3177 476 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 44 167 IPR012429 -
Mtr1g3177 476 PANTHER LD22376P 12 476 - -
Mtr1g3177 476 PANTHER OS05G0155700 PROTEIN 12 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3177 Mtr-Chr1 43069088 43073727 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3177 K10532 - gmx:100802361 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3130 7 48267339 48270976 Mtr1g3177 1 43069088 43073727 PCT