Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3175 ATGGAGAAAAAGGTTGAGAACGCTATGATTAGCTATGATCCAAAATCAAAAACAACCCTAGATCATATTCCTCAACCCCAACCCATTCTCAAGAAGGGATCATCAAAAGGATCTAAGAATTTCTTTAAGGTCGTTGTATTCATGTTGCGAGGGCATTCTCGTAAAACAAAATCGATTATGCCTATTGATAATGAGTCTAAAAGCATGTGGAAGAAGCTTTTGGGGTCCATGAGACCTATGCACCTTCAAAGCAACCAATCACCACCGCAAATTCTTAACGGTGAGAATAACCATAAAAAAGTGGTTATTGAAAATAATGTTAATAGCATCATTGATACTCAAGGAGAGGATGGGTTTCATAATGCATCGGAGTTTCTGAATTCGCCGTCTCCGACCAGAAGCTGCCTTGCTTCGGTGGCTAGTAGCCGCTACGCTTCCGCGGTGGGGCTAAGTGAAATGGTTGAGGAGGAGAAAGAGGAAGAGATTGTGGAAAAGGATAATAATAATAATAATAATAATAATACTAATGAGAATGATGATGACATGATTGATGCCGATGCGGCGGGGCTAAATGAAATGGTTGAGGAGGAGAAAAAGGAAGAGATTGTGAATAAGGATAGTAATAATAATAATGAGATTGATGAAGATGACATGATTGATGCCAAAGCTGAAGATTTTATTGCTAAATTTTATCGAGAAATGAGGTTGCAGCGTATGGATGTACGTTACAATGAGATGAGTATGAGGTCATTAGGGTTATGA 762 0.3885 MEKKVENAMISYDPKSKTTLDHIPQPQPILKKGSSKGSKNFFKVVVFMLRGHSRKTKSIMPIDNESKSMWKKLLGSMRPMHLQSNQSPPQILNGENNHKKVVIENNVNSIIDTQGEDGFHNASEFLNSPSPTRSCLASVASSRYASAVGLSEMVEEEKEEEIVEKDNNNNNNNNTNENDDDMIDADAAGLNEMVEEEKKEEIVNKDSNNNNEIDEDDMIDAKAEDFIAKFYREMRLQRMDVRYNEMSMRSLGL* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3175 253 MobiDBLite consensus disorder prediction 162 181 - -
Mtr1g3175 253 Pfam Cotton fibre expressed protein 216 246 IPR008480 -
Mtr1g3175 253 PANTHER COTTON FIBER PROTEIN 1 187 - -
Mtr1g3175 253 PANTHER COTTON FIBER PROTEIN 187 247 - -
Mtr1g3175 253 PANTHER COTTON FIBER PROTEIN 1 187 - -
Mtr1g3175 253 PANTHER COTTON FIBER PROTEIN 187 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3175 Mtr-Chr1 43059937 43061094 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3175 - - mtr:MTR_1g087720 423.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3469 7 51679619 51680589 Mtr1g3175 1 43059937 43061094 PCT