Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3159 ATGGGAAACCAAGTCTCATTTCGTCCTTCAGATCCAACAGGTAAAGTAGTTTTCTTAGATGGTTCAGTTCATGAATTTGATGAAGCAATAACAGTGGCAGAGTTAATGATGGATCATCCACAAAAAGTAGTAGTTGAGTTTCATTCAGCTGTGAACCAAAAAAGACCAACACCATTACCTGCTGACAAGAAGCTAGATATGAACAAGATATATTTGATGCTTCCAGTGAAGCAAGGGAAGCCTATTGGTTTAAGCGGCGAAGAAACTCGCCGAGTTCTTTTGATGGTTAATTCTATTCTGAATTCTAATTATGTTTTGTGTTCTTCTAAGTTTCTTCCTTGGTTTAGTAGTTTATGTCATAACAGTGAAATTGTGGAACCTCAGAGAAAGGAAGAGGTGATGGAGGAGAAGGGAGAGAGACATGATTTTTCGGAGAATTTGCCGGAAATAATGGAAGGGAGACCAGATTATTTGAATAGGCAGATTTCAGGGAAAGGGTGGAAGCCTAGCTTGGATACTATTAAGGAGAAGAATATTGAGAAAAAACATACTCATTGGTTGTTCCTCAAGAGTTTTTAG 579 0.3817 MGNQVSFRPSDPTGKVVFLDGSVHEFDEAITVAELMMDHPQKVVVEFHSAVNQKRPTPLPADKKLDMNKIYLMLPVKQGKPIGLSGEETRRVLLMVNSILNSNYVLCSSKFLPWFSSLCHNSEIVEPQRKEEVMEEKGERHDFSENLPEIMEGRPDYLNRQISGKGWKPSLDTIKEKNIEKKHTHWLFLKSF* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3159 192 Pfam PADRE domain 1 176 IPR025322 -
Mtr1g3159 192 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 183 - -
Mtr1g3159 192 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3159 Mtr-Chr1 42880063 42881138 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3159 - - gmx:100784884 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3159 1 42880063 42881138 Mtr1g3159 1 42880063 42881138 ECH
Mtr7g3475 7 51737808 51738753 Mtr1g3159 1 42880063 42881138 PCT