Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3149 ATGGCAGCAACAATGGCTGGTGTGAGTCTTTCAAGCCCTAGAGTAATTTTCAAGGGACCAGAGTCTCTTCAAAAGTCTCAGGCCATCAGGTCCGGACCGGTGTTCATGCTCAACCAAAGATGGACCGGTGCAGTCAGTTCCGGTAGGATGGTAAGCATTCGACCAGTGCAAGCATCACCGGACATAACCGGGAAGGTGGAAGAGAGCATAAAGAGTGCGGAAGAGGCGTGTGCAGGAGACGCCACTAGCGGTGAATGTGTGGCGGCGTGGGATGAGGTGGAGGAATTGAGTGCAGCGGCAAGCCATGCAAGGGATAAGAAAAAGACGTCGGACCCTCTCGAGGAATACTGCAAGGACAATCCGGAGACTGATGAGTGTCGCACATATGATAACTGA 396 0.5278 MAATMAGVSLSSPRVIFKGPESLQKSQAIRSGPVFMLNQRWTGAVSSGRMVSIRPVQASPDITGKVEESIKSAEEACAGDATSGECVAAWDEVEELSAAASHARDKKKTSDPLEEYCKDNPETDECRTYDN* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3149 131 PANTHER CALVIN CYCLE PROTEIN CP12-1 3 130 - -
Mtr1g3149 131 SMART CP12_2 62 131 IPR003823 -
Mtr1g3149 131 MobiDBLite consensus disorder prediction 100 131 - -
Mtr1g3149 131 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 3 130 IPR039314 -
Mtr1g3149 131 Pfam CP12 domain 63 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3149 Mtr-Chr1 42755953 42756622 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3149 - - pop:7495216 160.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3482 7 51817906 51818366 Mtr1g3149 1 42755953 42756622 PCT