Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3073 ATGACAATGGCATCTGACCCATCTACAAGGGTCAAGGTCACGTCCAATTTTCAACAAGCTTCTCAACATGGTTTAAATGTGGGAAGAACATGGGCTTTCAACGATGGAGATTCTAAACCTCTTCAAATTTCTCCTGGTTCTTATGATGAAAATGTCTTCAAGGGTTTGGATTTTGTGATATCAGAGGCAAGAAAATATGGAGTGAAACTTATACTGAGCTTAGTGAATAATTGGAATGATTTTGGAGGCAAAAAGAAATATGTGCAGTGGGCAAGAGAACGTGGTCAAAATGTCAAAATTGAAGATGACTTCTTTATTAACCCTCTTGTTAAGCAATACTACAAAAACAATGTTAAGGCCGTGCTGACAAGAAAGAACACCATAAACGGGGTATTATACAAAGATGATCCAACTATTTTTGCATGGGAGCTTATGAATGAACCTCGTTGCATAAATAATGACTCTGGAAAATCAATTCAGAATTGGGTTGGTGAGATGGCGGCCTATGTCAAATTCATTGATAGAAATCATTTGCTGGAAATAGGGCTTGAAGGGTTCTACGGTGAAACAATGCCACAAAAGAAACTATTCAATCCCAATTCTTTTCCCGTTGGAACTGATTTTATCTCGAACAATCAAATTCCTCAAATCGATTTTGCAACCATTCATTTATACCCCGATACATGGTTACAAGGCTCAAACGAGAGAGCCAAAAGTGCATTTGTTGACAAATGGATAGAAGCTCATTTTAAGGACTCAAACACTATTTTAGGGAAGCCCATTATTGTACAAGAGTTTGGAAAGTCTTCAAAGTCACCTGGATTTACCGTAGCTATAAGGGATAATTACTTCAAGAAAGTATACAATGCCATAGCTACAAGTGCTATGAGTGGAGGCTCATGTGCAGGTGGAATTTTCTGGCAACTCATGTCTCAAGGAATGGATAGCTATGGAGATGGAAATGAAGTCATTTTTGAGAACAATCCTTCAACTGCCGAGGTCATCAAACAACAATCTGTGACAATGTCAAAAATCAAATAG 1041 0.3794 MTMASDPSTRVKVTSNFQQASQHGLNVGRTWAFNDGDSKPLQISPGSYDENVFKGLDFVISEARKYGVKLILSLVNNWNDFGGKKKYVQWARERGQNVKIEDDFFINPLVKQYYKNNVKAVLTRKNTINGVLYKDDPTIFAWELMNEPRCINNDSGKSIQNWVGEMAAYVKFIDRNHLLEIGLEGFYGETMPQKKLFNPNSFPVGTDFISNNQIPQIDFATIHLYPDTWLQGSNERAKSAFVDKWIEAHFKDSNTILGKPIIVQEFGKSSKSPGFTVAIRDNYFKKVYNAIATSAMSGGSCAGGIFWQLMSQGMDSYGDGNEVIFENNPSTAEVIKQQSVTMSKIK* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3073 346 Pfam Cellulase (glycosyl hydrolase family 5) 18 293 IPR001547 GO:0004553|GO:0071704
Mtr1g3073 346 Gene3D Glycosidases 1 346 - -
Mtr1g3073 346 PANTHER - 1 346 IPR045053 GO:0004553
Mtr1g3073 346 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 1 346 - -
Mtr1g3073 346 SUPERFAMILY (Trans)glycosidases 13 330 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3073 Mtr-Chr1 42027422 42031071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3073 1 346 Glycoside Hydrolase AT5G66460 56.358 1.07e-141 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3073 K19355 - gmx:100791612 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3073 1 42027422 42031071 Mtr1g3073 1 42027422 42031071 ECH