Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3069 ATGGGGTTCAAAATTTTGTTATTGAGTCTATTGATTTATTTCATATCAGCTTTGGTTATTTTTCAACATGGGAACAGCAAAAGAGTTAACGTTGGTGGCGGTTTCGTTCAAAGAAAAGGAAGAACATGGGCTTGCAACGATGGAGGTTATAAAGCTCTTCAGATCTCTCCTGGCAAGTACGATGAAAATGTCTTCAGGGGATTAGATTTTGTGATATCAGAGTCAAAAAAATACGGAGTGCAACTTATACTTGGCTTGGTGAATAATTGGAATGCTTTGGGAGGAAAACATAAATATGTACAATGGGCAAGAGAACGTGGTCAACATGTCAAAAGCGACGATGACTTCTTTACACATCCCGTTGTTAAGCAATACTACAAAAACCATGTTAAGGCTGTGCTGACAAGAAATAACACTATAAATGGGGTGTTATATAAGGATGATCCAACCATTTTCGCTTGGGAGCTTATAAACGAACCACGTTATGTAAATGACTCTGGAAATTCAATTCAGAATTGGGTTCGTGAGATGGCGACATTTGTAAAATCCATTGATAACAAACATTTGCTCGAAATAGGGCTTGAAGGGTTCTACGCTGAAACAACGCCACAAAAGCAGTTCAATCTCAATTCTGTTAAAGTCGGAACTGATTTTATCTCCAATAATCAAATTCCTCAAATCGATTTTGCTACCATTCATGTATATCCCGATGAATGGTTACAGGGCTCAAATGAAACAGCTAAAAGTCACTTTGTTGATGAATGGATAGAAGCTCATATTCAAGACTCAAATACTATTTTAAAAAAGCCCTTGGTTATAGCAGAGTTTGGAAAGTCTTCAAAATCACATGGATATAGCATAGCTATAAGGGATAATTACTTTAAGAAAGTATACAATGCCATATCTAGAAGTGCTATCAATGGAGGCTCATGTGCAGGTGGAATTTTCTGGCAACTCCTATCTCAAGGGATGGATACCTATGGAGATGGATATGAAGTCGTTTTTGAGAATTGTCCTTCAACTGGTGAGATCATCAAACAACAATCTATGAAGATGTCACATATCAAATAG 1071 0.3707 MGFKILLLSLLIYFISALVIFQHGNSKRVNVGGGFVQRKGRTWACNDGGYKALQISPGKYDENVFRGLDFVISESKKYGVQLILGLVNNWNALGGKHKYVQWARERGQHVKSDDDFFTHPVVKQYYKNHVKAVLTRNNTINGVLYKDDPTIFAWELINEPRYVNDSGNSIQNWVREMATFVKSIDNKHLLEIGLEGFYAETTPQKQFNLNSVKVGTDFISNNQIPQIDFATIHVYPDEWLQGSNETAKSHFVDEWIEAHIQDSNTILKKPLVIAEFGKSSKSHGYSIAIRDNYFKKVYNAISRSAINGGSCAGGIFWQLLSQGMDTYGDGYEVVFENCPSTGEIIKQQSMKMSHIK* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3069 356 Gene3D Glycosidases 39 356 - -
Mtr1g3069 356 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 40 355 - -
Mtr1g3069 356 SUPERFAMILY (Trans)glycosidases 41 336 IPR017853 -
Mtr1g3069 356 Pfam Cellulase (glycosyl hydrolase family 5) 57 306 IPR001547 GO:0004553|GO:0071704
Mtr1g3069 356 PANTHER - 40 355 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3069 Mtr-Chr1 41982900 41987087 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3069 40 356 Glycoside Hydrolase AT1G02310 54.938 8.53e-123 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3069 K19355 - gmx:100791612 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3069 1 41982900 41987087 Mtr1g3069 1 41982900 41987087 ECH