Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3068 ATGGGGTTTCAAATTTTGGTATTGACATATTTTCTAGTGGCTTTGGCTGTTATTCAACACGTTGGTGCTAACATTGATGCTGGTTTCGTTCAAAGAAAAGGAACACATTTTATTCTCAATGGGAAGACACACTATGTGAATGGATTCAATTCCTATTGGTTAACAACCATGGCATCTGATCCATCTACAAGTTCTAAGGTCACTTCCACTTTTCAACAAGCTTCTCAACATGGTTTAAATGTAGGAAGAACATGGGCTTTCAATGATGGAGGTTATAAAGCTCTTCAAATCTCTCCTGGTTCTTATGATGAAAATGTTTTCAAGGCATTGGATTTTGTGATATCAGAGGCAAGCAAATATGGAGTGAAACTTATACTTAGCTTGGTGAATAATTGGAATGATTTTGGAGGCAAGAACAAATATGTGCAGTGGGCAAAAGAACGTGGTCAAAATATCAAAAACGATGATGACTTCTTTACACACCCCGTTGTTAAGCAATACTACAAAAATCATGTTAAGGCTGTGCTGACAAGAAAGAACACCATTAGTGGAGTGTTATACAAGGATGACCCAACTATTTTTGCTTGGGAGCTTATGAATGAGCCCCGTTACGTAAATGACTCTGGAAAATCAATTCAGAATTGGGTTAGTGAGATGGCTCCCTACGTCAAATCCATTGATAGCAATCATATGTTGGAAATAGGGCTTGAAGGGTTCTACAGTGAAACAATGCTACAAAAGAAGCAGTTCAATCCCAATACTGCTCAAGTCGGAACTGATTTTATCTCTAACAATCAAATTCCTCAAATTGATTTTGCAACCATTCATATATACCCTGATCAATGGATACAAGGCTCAGAAGAGACTACCCAAAATGTATTTGTTGATAAATGGATAGGAGCACACATTCAGGATTCAAATACTGTTTTAGGAAAGCCAATAATTATAGCAGAGTTTGGAAAGTCTTCAAAGTCAGCTGGATATAGCATAGATAAAAGGGACAGTTACTTTAAGAAAGTATACAATGCCATATCTACAAGTGCTATCAGTGGAGGCTCATGTGCAGGTGGAATTTTTTGGCAACTCCTGTCTCAAGGGATGGATAACATGGGAGATGGCTATGAAGTCATTTTTGAGAATAGTCTTTCAACTTCCCAAGTCATCAAACAACAATCTTTAAAAATGTCAAGTATCAGAAAGCAGAATTGA 1209 0.3722 MGFQILVLTYFLVALAVIQHVGANIDAGFVQRKGTHFILNGKTHYVNGFNSYWLTTMASDPSTSSKVTSTFQQASQHGLNVGRTWAFNDGGYKALQISPGSYDENVFKALDFVISEASKYGVKLILSLVNNWNDFGGKNKYVQWAKERGQNIKNDDDFFTHPVVKQYYKNHVKAVLTRKNTISGVLYKDDPTIFAWELMNEPRYVNDSGKSIQNWVSEMAPYVKSIDSNHMLEIGLEGFYSETMLQKKQFNPNTAQVGTDFISNNQIPQIDFATIHIYPDQWIQGSEETTQNVFVDKWIGAHIQDSNTVLGKPIIIAEFGKSSKSAGYSIDKRDSYFKKVYNAISTSAISGGSCAGGIFWQLLSQGMDNMGDGYEVIFENSLSTSQVIKQQSLKMSSIRKQN* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3068 402 SUPERFAMILY (Trans)glycosidases 29 379 IPR017853 -
Mtr1g3068 402 PANTHER - 6 398 IPR045053 GO:0004553
Mtr1g3068 402 Pfam Cellulase (glycosyl hydrolase family 5) 48 336 IPR001547 GO:0004553|GO:0071704
Mtr1g3068 402 Gene3D Glycosidases 25 399 - -
Mtr1g3068 402 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 6 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3068 Mtr-Chr1 41958964 41961178 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3068 4 400 Glycoside Hydrolase AT5G66460 55.224 3.35e-157 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3068 K19355 - gmx:100791612 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3068 1 41958964 41961178 Mtr1g3068 1 41958964 41961178 ECH