Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3035 ATGTCTCCTGATATCATAACTGCTGCAACCAACATTACCAACACTCAATCTAAGGCCACAAGACGTGCCTTCGTCACCTTCCTTGCTGGAAATGGTGATTATGTGAAGGGTGTTGTTGGTTTAGCTAAAGGTCTTCGTAAAGTCAAAACCATGTATCCTTTAGTGGTTGCAGTGTTACCTGATGTTCCTCAAGAACATAGGAATATTCTCACCTCTCAAGGTTGCATTGTTAGAGAAATTGAACCTGTTTATCCTCCAGAAAACCAAACTCAGTTTGCCATGGCTTATTATGTCATCAACTACTCCAAATTACGTATTTGGGCTTTTGAGGAATATGACAAGATGATTTACCTTGATGGTGACATACAAGTTTTTGAAAACATTGATCACCTATTTGACTTACCAAACAACTATTTCTATGCTGTGATGGATTGCTTTTGTGAGGCCTCTTGGCGTCATACCAAACAGTACGAAATCGGTTACTGTCAACAGTGCCCTGACAAGGTTCAGTGGCCTGCTAACTTTGGGCCCAAACCTCCTCTATATTTCAATGCTGGCATGTTTGTTTATGAACCAAACATGGCTACTTACCATGATCTGCTTCAAAAACTTCAAGTCACTAAGCCAACTTCCTTTGCTGAGCAGGATTTTTTGAACATATATTTCAAAGACAAATATAAGCCAATTCCAAATGTTTATAATCTTGTGTTGGCCATGTTGTGGCGTCACCCTGAGAATGTTGAACTTGAGAAAGTCAAAGTTGTTCATTACTGTGCAGCGGGGTCTAAGCCTTGGAGGTACACTGGTGTGGAAGAGAATATGCAGAGAGAAGATATAAAGATGTTGGTGAAGAAATGGTGGGATGTATATGAAGATGAGAGTTTGGATTACAAGCAACCTGTTAATGCAAATCATTTGGCTTCAGCAATTTTGGAAGCTTCTGATTTGAAGGTTGTCCCAGCTCCATCTGCCGCTTAA 978 0.4029 MSPDIITAATNITNTQSKATRRAFVTFLAGNGDYVKGVVGLAKGLRKVKTMYPLVVAVLPDVPQEHRNILTSQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWAFEEYDKMIYLDGDIQVFENIDHLFDLPNNYFYAVMDCFCEASWRHTKQYEIGYCQQCPDKVQWPANFGPKPPLYFNAGMFVYEPNMATYHDLLQKLQVTKPTSFAEQDFLNIYFKDKYKPIPNVYNLVLAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGVEENMQREDIKMLVKKWWDVYEDESLDYKQPVNANHLASAILEASDLKVVPAPSAA* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3035 325 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 19 298 IPR029044 -
Mtr1g3035 325 SUPERFAMILY Nucleotide-diphospho-sugar transferases 25 298 IPR029044 -
Mtr1g3035 325 Pfam Glycosyl transferase family 8 26 268 IPR002495 GO:0016757
Mtr1g3035 325 PANTHER GALACTINOL SYNTHASE 2 1 309 IPR030515 GO:0006012|GO:0047216
Mtr1g3035 325 CDD GT8_Glycogenin 22 292 - -
Mtr1g3035 325 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3035 Mtr-Chr1 41553897 41555821 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g3035 1 325 Glycosyltransferase AT1G56600 71.940 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3035 K18819 - gmx:548050 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3034 1 41542921 41544837 Mtr1g3035 1 41553897 41555821 ECH
Mtr1g3035 1 41553897 41555821 Mtr1g3035 1 41553897 41555821 ECH
Mtr7g3592 7 52961940 52964497 Mtr1g3035 1 41553897 41555821 PCT